SEARCH OPTIONS

lncRNA id
CPC status
Max. peptide length
Max. expression
Potential function
Results confidence
Order results by

Current search details:

Found 9692 records in
Solanum tuberosum

CPC status:   #
Max. peptide length:   #
Max. expression:   #
Potential function:   #
Results confidence:   Show all
Order by:   lncRNA ID


Record details CANTATAdb ID Species Location CPC status (score) Swiss-Prot best hit Max. peptide length Max. expression Potential function Confidence
CNT0016898 S. tuberosum 1:85053341-85058366 (+) noncoding (-1.15752)0.0000000000002 (sp|Q8S8I1|QWRF3_ARATH) 99 13.159 Confident lncRNA
CNT0016897 S. tuberosum 1:515929-517265 (+) coding (1.29444)3e-32 (sp|Q6L438|R1A6_SOLDE) 445 6.535 Confident lncRNA
CNT0016896 S. tuberosum 1:512561-512858 (+) noncoding (-0.94078)- 99 0 Confident lncRNA
CNT0016895 S. tuberosum 1:43352040-43353370 (+) noncoding (-0.696313)- 34 8.372 Confident lncRNA
CNT0016894 S. tuberosum 1:43352040-43352818 (+) noncoding (-0.745736)- 42 4.885 Confident lncRNA
CNT0016893 S. tuberosum 1:53197640-53232783 (+) noncoding (-1.23834)- 45 0.967 Confident lncRNA
CNT0016892 S. tuberosum 1:53232223-53232783 (+) noncoding (-1.05519)- 57 0 Confident lncRNA
CNT0016891 S. tuberosum 1:34126548-34127457 (-) noncoding (-1.01195)- 57 1.815 Confident lncRNA
CNT0016890 S. tuberosum 1:33378376-33378880 (-) coding (0.337233)3e-46 (sp|Q27IK7|POK1_ARATH) 93 3.532 Confident lncRNA
CNT0016889 S. tuberosum 1:2492505-2498845 (-) noncoding (-0.427273)3e-22 (sp|Q6WFW1|GLT3_CROSA) 145 15.836 Confident lncRNA
CNT0016888 S. tuberosum 1:2497147-2498845 (-) noncoding (-0.14305)1e-22 (sp|Q6WFW1|GLT3_CROSA) 134 16.165 Low-confidence lncRNA
CNT0016887 S. tuberosum 1:82275821-82276107 (-) noncoding (-1.3247)- - 0 Confident lncRNA
CNT0016886 S. tuberosum 1:78955133-78963236 (-) noncoding (-0.969126)- 70 24.908 Confident lncRNA
CNT0016885 S. tuberosum 1:78955133-78963240 (-) noncoding (-0.969016)- 70 24.946 Confident lncRNA
CNT0016884 S. tuberosum 1:78955133-78963240 (-) noncoding (-0.986056)- 70 20.624 Confident lncRNA
CNT0016883 S. tuberosum 1:78975807-78976811 (-) noncoding (-0.85511)5e-27 (sp|Q8H5T6|LTI6A_ORYSJ) 74 165.097 Confident lncRNA
CNT0016882 S. tuberosum 1:77294467-77297099 (-) noncoding (-0.983681)4e-21 (sp|Q5VND6|NAP1A_ORYSJ) 105 5.313 splicing regulationConfident lncRNA
CNT0016881 S. tuberosum 1:1181001-1241753 (-) noncoding (-1.21414)0.000007 (sp|O00410|IPO5_HUMAN) 49 15.902 splicing regulationConfident lncRNA
CNT0016880 S. tuberosum 1:77456484-77460081 (+) noncoding (-0.800164)- 136 1.737 Confident lncRNA
CNT0016879 S. tuberosum 1:77456484-77461156 (+) noncoding (-0.857084)- 120 1.881 Confident lncRNA
CNT0016878 S. tuberosum 1:76010479-76016116 (-) noncoding (-0.879577)- 78 11.079 Confident lncRNA
CNT0016877 S. tuberosum 1:69920102-69931607 (+) noncoding (-0.250971)- 168 26.261 Confident lncRNA
CNT0016876 S. tuberosum 1:69920109-69931607 (+) noncoding (-0.176535)- 231 26.198 Confident lncRNA
CNT0016875 S. tuberosum 1:69920117-69931607 (+) noncoding (-0.225978)- 228 17.399 Confident lncRNA
CNT0016874 S. tuberosum 1:33366328-33367726 (+) noncoding (-0.846406)2e-78 (sp|Q27IK7|POK1_ARATH) 69 0 Confident lncRNA
CNT0016873 S. tuberosum 1:68053399-68063140 (+) noncoding (-1.14108)0.0000000007 (sp|Q6DFN1|NDUF3_XENTR) 107 33.075 Confident lncRNA
CNT0016872 S. tuberosum 1:68074515-68074878 (+) noncoding (-1.38408)0.0000009 (sp|Q9URU2|DNA2_SCHPO) 38 0 Confident lncRNA
CNT0016871 S. tuberosum 1:53260716-53284920 (-) coding (0.530119)0.000000000004 (sp|Q58DC2|DCAF4_BOVIN) 496 10.513 Confident lncRNA
CNT0016870 S. tuberosum 1:83734290-83735057 (-) noncoding (-1.13519)- 49 1.757 Confident lncRNA
CNT0016869 S. tuberosum 1:69902680-69903419 (-) noncoding (-0.97758)1e-44 (sp|Q5XF59|HIBC4_ARATH) 58 17.694 Confident lncRNA
CNT0016868 S. tuberosum 1:51588781-51595732 (+) noncoding (-0.07401)1e-28 (sp|Q9LP24|Y1571_ARATH) 307 27.21 Low-confidence lncRNA
CNT0016867 S. tuberosum 1:80787630-80787835 (-) noncoding (-1.16568)- - 0 Confident lncRNA
CNT0016866 S. tuberosum 1:80783956-80784277 (-) noncoding (-0.924197)- 60 0 Confident lncRNA
CNT0016865 S. tuberosum 1:80849767-80854980 (-) noncoding (-0.401106)0.0000001 (sp|P0CB26|Y1089_ARATH) 123 33.715 Confident lncRNA
CNT0016864 S. tuberosum 1:87129093-87129681 (-) noncoding (-1.31272)- 40 0.843 Confident lncRNA
CNT0016863 S. tuberosum 1:73937609-73938158 (-) coding (0.414336)2e-23 (sp|Q9SG12|CAMK6_ARATH) 73 3.922 Confident lncRNA
CNT0016862 S. tuberosum 1:82300824-82302867 (+) coding (0.81807)1e-55 (sp|D4N501|DIOX2_PAPSO) 393 43.451 Low-confidence lncRNA
CNT0016861 S. tuberosum 1:1636852-1638409 (-) noncoding (-1.13326)- 41 24.438 Confident lncRNA
CNT0016860 S. tuberosum 1:1633000-1636771 (-) coding (5.69499)2e-100 (sp|Q9SJW9|CDT1A_ARATH) 468 2.464 Low-confidence lncRNA
CNT0016859 S. tuberosum 1:68527981-68548535 (-) noncoding (-1.25156)- 50 3.297 Confident lncRNA
CNT0016858 S. tuberosum 1:84972174-84976470 (+) coding (0.194362)- 302 34.204 Confident lncRNA
CNT0016857 S. tuberosum 1:35479946-35483130 (-) noncoding (-0.791164)- 91 2.777 Confident lncRNA
CNT0016856 S. tuberosum 1:35623498-35632412 (-) noncoding (-1.11775)- 40 0.45 Confident lncRNA
CNT0016855 S. tuberosum 1:35623498-35632413 (-) noncoding (-1.20037)- 40 14.562 Confident lncRNA
CNT0016854 S. tuberosum 1:35623498-35632414 (-) noncoding (-1.20282)- 40 14.3 Confident lncRNA
CNT0016853 S. tuberosum 1:35623498-35632414 (-) noncoding (-1.20395)- 40 0.806 Confident lncRNA
CNT0016852 S. tuberosum 1:56888189-56891034 (-) noncoding (-1.07883)- 56 0 Confident lncRNA
CNT0016851 S. tuberosum 1:56889525-56890820 (-) noncoding (-1.12669)- 53 0 Confident lncRNA
CNT0016850 S. tuberosum 1:44897271-44897853 (+) noncoding (-1.17552)0.000000000000003 (sp|Q921C3|BRWD1_MOUSE) 36 0 Confident lncRNA
CNT0016849 S. tuberosum 1:44896495-44896951 (+) noncoding (-1.16064)- - 0 Confident lncRNA