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ENST00000620788 (lncRNA) and ENST00000263955: detailed information for the interacting components



Function(s) assigned to this lncRNA-RNA interaction (ENST00000620788 vs ENST00000263955)

Number of records: 2

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
ENST00000263955 serine/threonine kinase 17b protein coding ENST00000620788 630 300 UTR3 Trans
ENST00000263955 serine/threonine kinase 17b protein coding ENST00000620788 570 284 UTR3 Trans

Expression


NOTE: Expression values are provided at the transcript level. Differential expressio analysis was performed at the gene level.


Expression for ENST00000620788 (lncRNA)Expression for ENST00000263955



Is lncRNA (ENST00000620788) differentially expressed?
Gene id Direction Adjusted p-value Fold change EBSeq confirmed? edgeR confirmed?
ENSG00000019144 down 0.0000176762700402 1.59335 YES YES


Is the interacting transcript (ENST00000263955) differentially expressed?
Gene id Direction Adjusted p-value Fold change EBSeq confirmed? edgeR confirmed?
ENSG00000081320 down 0.000000000016969663744 2.13212 YES YES

NOTE: the differential expression results were calculated for KTCN vs non-KTCN samples.
The KTCN samples: KC_15, KC_16, KC_17, KC_18, KC_19, KC_20, KC_21, KC_22, KC_23, KC_25, KC_26, KC_28, KC_30, KC_31, KC_32, KC_34, KC_55
The non-KTCN samples: KR_08, KR_13, KR_14, KR_15, KR_18, KR_19, KR_21, KR_23, KR_24, KR_25, KR_26, KR_27, KR_28, KR_33, KR_35, KR_48, KR_52


Other interactions


All interactions for ENST00000620788 (lncRNA)All interactions for ENST00000263955