| | ENST00000613356 | ENSG00000172172 | 8:120395847-120416079(-) | MRPL13 | retained intron | mitochondrial ribosomal protein L13 |
| | ENST00000490400 | ENSG00000123728 | X:132217665-132219443(-) | RAP2C | processed transcript | RAP2C, member of RAS oncogene family |
| | ENST00000590614 | ENSG00000267680 | 19:44094386-44101088(+) | ZNF224 | retained intron | zinc finger protein 224 |
| | ENST00000490404 | ENSG00000114268 | 3:48547878-48550235(-) | PFKFB4 | processed transcript | 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 |
| | ENST00000503605 | ENSG00000186468 | 5:82276154-82278143(-) | RPS23 | processed transcript | ribosomal protein S23 |
| | ENST00000602406 | ENSG00000269925 | 1:7776382-7776775(+) | RP3-467L1.6 | sense intronic | sense_intronic |
| | TCONS_00211171 | ENSG00000202069 | 6:71603967-71780438(+) | RNU4-66P | novel noncoding | RNA, U4 small nuclear 66, pseudogene |
| | ENST00000493475 | ENSG00000163359 | 2:237356789-237357883(-) | COL6A3 | retained intron | collagen, type VI, alpha 3 |
| | ENST00000563770 | ENSG00000261008 | 16:72479750-72627686(-) | AC004158.2 | lincRNA | lincRNA |
| | ENST00000473860 | ENSG00000244687 | 20:50096058-50111566(-) | UBE2V1 | processed transcript | ubiquitin-conjugating enzyme E2 variant 1 |
| | ENST00000571188 | ENSG00000220660 | 6:136364418-136365079(+) | RP3-406A7.3 | processed transcript | transcribed_processed_pseudogene |
| | ENST00000576454 | ENSG00000262380 | 16:15683289-15684570(+) | CTB-193M12.3 | sense intronic | sense_intronic |
| | ENST00000580979 | ENSG00000264456 | 17:30971651-30973312(+) | RP11-848P1.2 | sense intronic | sense_intronic |
| | ENST00000534085 | ENSG00000118058 | 11:118506560-118507765(+) | KMT2A | retained intron | lysine (K)-specific methyltransferase 2A |
| | ENST00000473868 | ENSG00000162627 | 1:98661809-98677331(+) | SNX7 | processed transcript | sorting nexin 7 |
| | ENST00000517967 | ENSG00000253222 | 8:32171381-32287566(+) | RP11-669B22.1 | sense intronic | sense_intronic |
| | ENST00000507644 | ENSG00000250829 | 4:186890968-186892366(+) | RP11-11N5.1 | lincRNA | lincRNA |
| | ENST00000556072 | ENSG00000258301 | 14:76781732-76786724(-) | RP11-488C13.5 | lincRNA | lincRNA |
| | ENST00000535976 | ENSG00000257097 | 12:122395605-122400857(+) | CLIP1-AS1 | lincRNA | CLIP1 antisense RNA 1 |
| | ENST00000589831 | ENSG00000182087 | 19:1012540-1013639(-) | TMEM259 | retained intron | transmembrane protein 259 |
| | ENST00000476561 | ENSG00000250990 | 7:77246339-77258123(-) | AC073635.5 | antisense | antisense |
| | ENST00000430903 | ENSG00000228241 | 13:85968998-85969533(+) | MOB1AP1 | processed pseudogene | MOB kinase activator 1A pseudogene 1 |
| | ENST00000478723 | ENSG00000205981 | 3:180985409-180989741(-) | DNAJC19 | retained intron | DnaJ (Hsp40) homolog, subfamily C, member 19 |
| | ENST00000478724 | ENSG00000235978 | 3:4814311-4816276(-) | AC018816.3 | antisense | antisense |
| | ENST00000556078 | ENSG00000140025 | 14:89799172-89924627(-) | EFCAB11 | processed transcript | EF-hand calcium binding domain 11 |
| | ENST00000476566 | ENSG00000111229 | 12:110436586-110440507(-) | ARPC3 | retained intron | actin related protein 2/3 complex, subunit 3, 21kDa |
| | ENST00000513092 | ENSG00000109606 | 4:24576549-24584537(-) | DHX15 | processed transcript | DEAH (Asp-Glu-Ala-His) box helicase 15 |
| | ENST00000513542 | ENSG00000250902 | 4:145514614-145517118(-) | SMAD1-AS1 | antisense | SMAD1 antisense RNA 1 |
| | ENST00000552762 | ENSG00000204852 | 12:110619835-110628826(+) | TCTN1 | processed transcript | tectonic family member 1 |
| | ENST00000513547 | ENSG00000008294 | 17:51001834-51016256(-) | SPAG9 | processed transcript | sperm associated antigen 9 |
| | ENST00000524258 | ENSG00000182372 | 8:1755777-1771294(+) | CLN8 | processed transcript | ceroid-lipofuscinosis, neuronal 8 (epilepsy, progressive with mental retardation) |
| | ENST00000495016 | ENSG00000008128 | 1:1703867-1704585(-) | CDK11A | processed transcript | cyclin-dependent kinase 11A |
| | ENST00000524707 | ENSG00000254606 | 11:28516831-28519341(+) | RP11-22P4.2 | lincRNA | lincRNA |
| | ENST00000513098 | ENSG00000109332 | 4:102809079-102827010(-) | UBE2D3 | processed transcript | ubiquitin-conjugating enzyme E2D 3 |
| | ENST00000487554 | ENSG00000011007 | 1:23744033-23750944(+) | TCEB3 | processed transcript | transcription elongation factor B (SIII), polypeptide 3 (110kDa, elongin A) |
| | ENST00000524252 | ENSG00000187229 | 8:18720904-18734405(+) | RP11-161I2.1 | antisense | antisense |
| | ENST00000481527 | ENSG00000168306 | 3:58505135-58522987(-) | ACOX2 | processed transcript | acyl-CoA oxidase 2, branched chain |
| | ENST00000507273 | ENSG00000204628 | 5:181236936-181237860(-) | GNB2L1 | retained intron | guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1 |
| | ENST00000481256 | ENSG00000188906 | 12:40312713-40320062(+) | LRRK2 | processed transcript | leucine-rich repeat kinase 2 |
| | ENST00000483938 | ENSG00000145012 | 3:188725267-188746618(+) | LPP | processed transcript | LIM domain containing preferred translocation partner in lipoma |
| | ENST00000463097 | ENSG00000141030 | 17:17248948-17255055(-) | COPS3 | retained intron | COP9 signalosome subunit 3 |
| | ENST00000497757 | ENSG00000114541 | 3:69333960-69433129(-) | FRMD4B | processed transcript | FERM domain containing 4B |
| | ENST00000500559 | ENSG00000245958 | 4:119512372-119552025(+) | RP11-33B1.1 | processed transcript | transcribed_unprocessed_pseudogene |
| | ENST00000587380 | ENSG00000168259 | 17:42012981-42014937(-) | DNAJC7 | retained intron | DnaJ (Hsp40) homolog, subfamily C, member 7 |
| | ENST00000481528 | ENSG00000134744 | 1:52460956-52461716(-) | ZCCHC11 | retained intron | zinc finger, CCHC domain containing 11 |
| | ENST00000587470 | ENSG00000062716 | 17:59837950-59840315(+) | VMP1 | retained intron | vacuole membrane protein 1 |
| | ENST00000458301 | ENSG00000223959 | 16:89980244-89996623(+) | AFG3L1P | processed transcript | AFG3-like AAA ATPase 1, pseudogene |
| | ENST00000587472 | ENSG00000104859 | 19:45069082-45070873(+) | CLASRP | retained intron | CLK4-associating serine/arginine rich protein |
| | ENST00000544911 | ENSG00000256950 | 12:121915332-121921391(+) | RP11-87C12.2 | retained intron | 26S proteasome non-ATPase regulatory subunit 9 {ECO:0000313|Ensembl:ENSP00000442210}; Uncharacterized protein {ECO:0000313|Ensembl:ENSP00000477146} |
| | ENST00000587475 | ENSG00000267766 | 18:63151113-63151320(-) | RP11-299P2.1 | sense intronic | sense_intronic |