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ENST00000558194 (lncRNA) and ENST00000280571: detailed information for the interacting components



Function(s) assigned to this lncRNA-RNA interaction (ENST00000558194 vs ENST00000280571)

Number of records: 1

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
ENST00000280571 Rab interacting lysosomal protein-like 2 protein coding ENST00000558194 621 282 UTR3 Trans

Expression


NOTE: Expression values are provided at the transcript level. Differential expressio analysis was performed at the gene level.


Expression for ENST00000558194 (lncRNA)Expression for ENST00000280571



Is lncRNA (ENST00000558194) differentially expressed?
Gene id Direction Adjusted p-value Fold change EBSeq confirmed? edgeR confirmed?
ENSG00000180304 - >0.05 - - -


Is the interacting transcript (ENST00000280571) differentially expressed?
Gene id Direction Adjusted p-value Fold change EBSeq confirmed? edgeR confirmed?
ENSG00000150977 down 0.00000352121441228 2.0082 . YES

NOTE: the differential expression results were calculated for KTCN vs non-KTCN samples.
The KTCN samples: KC_15, KC_16, KC_17, KC_18, KC_19, KC_20, KC_21, KC_22, KC_23, KC_25, KC_26, KC_28, KC_30, KC_31, KC_32, KC_34, KC_55
The non-KTCN samples: KR_08, KR_13, KR_14, KR_15, KR_18, KR_19, KR_21, KR_23, KR_24, KR_25, KR_26, KR_27, KR_28, KR_33, KR_35, KR_48, KR_52


Other interactions


All interactions for ENST00000558194 (lncRNA)All interactions for ENST00000280571