TCONS_00181000 (lncRNA) and ENST00000310455: detailed information for the interacting components



Function(s) assigned to this lncRNA-RNA interaction (TCONS_00181000 vs ENST00000310455)

Number of records: 1

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
ENST00000310455 protein phosphatase 1, regulatory subunit 3B protein coding TCONS_00181000 520 297 UTR3 Trans

Expression


NOTE: Expression values are provided at the transcript level. Differential expressio analysis was performed at the gene level.


Expression for TCONS_00181000 (lncRNA)Expression for ENST00000310455



Is lncRNA (TCONS_00181000) differentially expressed?
Gene id Direction Adjusted p-value Fold change EBSeq confirmed? edgeR confirmed?
ENSG00000189283 up 0.00013624821319 1.73686 YES YES


Is the interacting transcript (ENST00000310455) differentially expressed?
Gene id Direction Adjusted p-value Fold change EBSeq confirmed? edgeR confirmed?
ENSG00000173281 down 4.50525259985e-18 5.0089 YES YES

NOTE: the differential expression results were calculated for KTCN vs non-KTCN samples.
The KTCN samples: KC_15, KC_16, KC_17, KC_18, KC_19, KC_20, KC_21, KC_22, KC_23, KC_25, KC_26, KC_28, KC_30, KC_31, KC_32, KC_34, KC_55
The non-KTCN samples: KR_08, KR_13, KR_14, KR_15, KR_18, KR_19, KR_21, KR_23, KR_24, KR_25, KR_26, KR_27, KR_28, KR_33, KR_35, KR_48, KR_52