« Back to search



ENST00000564527 (lncRNA) and ENST00000310455: detailed information for the interacting components



Function(s) assigned to this lncRNA-RNA interaction (ENST00000564527 vs ENST00000310455)

Number of records: 1

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
ENST00000310455 protein phosphatase 1, regulatory subunit 3B protein coding ENST00000564527 584 287 UTR3 Trans

Expression


NOTE: Expression values are provided at the transcript level. Differential expressio analysis was performed at the gene level.


Expression for ENST00000564527 (lncRNA)Expression for ENST00000310455



Is lncRNA (ENST00000564527) differentially expressed?
Gene id Direction Adjusted p-value Fold change EBSeq confirmed? edgeR confirmed?
ENSG00000261616 - >0.05 - - -


Is the interacting transcript (ENST00000310455) differentially expressed?
Gene id Direction Adjusted p-value Fold change EBSeq confirmed? edgeR confirmed?
ENSG00000173281 down 4.50525259985e-18 5.0089 YES YES

NOTE: the differential expression results were calculated for KTCN vs non-KTCN samples.
The KTCN samples: KC_15, KC_16, KC_17, KC_18, KC_19, KC_20, KC_21, KC_22, KC_23, KC_25, KC_26, KC_28, KC_30, KC_31, KC_32, KC_34, KC_55
The non-KTCN samples: KR_08, KR_13, KR_14, KR_15, KR_18, KR_19, KR_21, KR_23, KR_24, KR_25, KR_26, KR_27, KR_28, KR_33, KR_35, KR_48, KR_52


Other interactions


All interactions for ENST00000564527 (lncRNA)All interactions for ENST00000310455