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ENST00000475168 (lncRNA) and ENST00000320892: detailed information for the interacting components



Function(s) assigned to this lncRNA-RNA interaction (ENST00000475168 vs ENST00000320892)

Number of records: 1

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
ENST00000320892 ring finger protein 144A protein coding ENST00000475168 546 309 UTR3 Trans

Expression


NOTE: Expression values are provided at the transcript level. Differential expressio analysis was performed at the gene level.


Expression for ENST00000475168 (lncRNA)Expression for ENST00000320892



Is lncRNA (ENST00000475168) differentially expressed?
Gene id Direction Adjusted p-value Fold change EBSeq confirmed? edgeR confirmed?
ENSG00000116918 up 0.00485563170162 1.23708 . .


Is the interacting transcript (ENST00000320892) differentially expressed?
Gene id Direction Adjusted p-value Fold change EBSeq confirmed? edgeR confirmed?
ENSG00000151692 up 0.0000124198768246 1.64371 YES YES

NOTE: the differential expression results were calculated for KTCN vs non-KTCN samples.
The KTCN samples: KC_15, KC_16, KC_17, KC_18, KC_19, KC_20, KC_21, KC_22, KC_23, KC_25, KC_26, KC_28, KC_30, KC_31, KC_32, KC_34, KC_55
The non-KTCN samples: KR_08, KR_13, KR_14, KR_15, KR_18, KR_19, KR_21, KR_23, KR_24, KR_25, KR_26, KR_27, KR_28, KR_33, KR_35, KR_48, KR_52


Other interactions


All interactions for ENST00000475168 (lncRNA)All interactions for ENST00000320892