ENST00000582596 (lncRNA) and ENST00000324537: detailed information for the interacting components



Function(s) assigned to this lncRNA-RNA interaction (ENST00000582596 vs ENST00000324537)

Number of records: 1

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
ENST00000324537 SH3-domain GRB2-like 3 protein coding ENST00000582596 514 283 UTR5 Trans

Expression


NOTE: Expression values are provided at the transcript level. Differential expressio analysis was performed at the gene level.


Expression for ENST00000582596 (lncRNA)Expression for ENST00000324537



Is lncRNA (ENST00000582596) differentially expressed?
Gene id Direction Adjusted p-value Fold change EBSeq confirmed? edgeR confirmed?
ENSG00000263961 down 0.00395091819822 1.98425 . YES


Is the interacting transcript (ENST00000324537) differentially expressed?
Gene id Direction Adjusted p-value Fold change EBSeq confirmed? edgeR confirmed?
ENSG00000140600 up 4.01228118304e-25 8.11387 YES YES

NOTE: the differential expression results were calculated for KTCN vs non-KTCN samples.
The KTCN samples: KC_15, KC_16, KC_17, KC_18, KC_19, KC_20, KC_21, KC_22, KC_23, KC_25, KC_26, KC_28, KC_30, KC_31, KC_32, KC_34, KC_55
The non-KTCN samples: KR_08, KR_13, KR_14, KR_15, KR_18, KR_19, KR_21, KR_23, KR_24, KR_25, KR_26, KR_27, KR_28, KR_33, KR_35, KR_48, KR_52