NOTE: Expression values are provided at the
transcript level. Differential expressio analysis was performed at the
gene level.
Expression for TCONS_00177955 (lncRNA)Expression for ENST00000336824Is lncRNA (
TCONS_00177955) differentially expressed?
| Gene id | Direction | Adjusted p-value | Fold change | EBSeq confirmed? | edgeR confirmed? |
| ENSG00000196220 | up | 0.00312181997142 | 1.54108 | . | YES |
Is the interacting transcript (
ENST00000336824) differentially expressed?
| Gene id | Direction | Adjusted p-value | Fold change | EBSeq confirmed? | edgeR confirmed? |
| ENSG00000075420 | down | 2.50184567904e-19 | 2.13856 | YES | YES |
NOTE: the differential expression results were calculated for KTCN vs non-KTCN samples.
The KTCN samples: KC_15, KC_16, KC_17, KC_18, KC_19, KC_20, KC_21, KC_22, KC_23, KC_25, KC_26, KC_28, KC_30, KC_31, KC_32, KC_34, KC_55
The non-KTCN samples: KR_08, KR_13, KR_14, KR_15, KR_18, KR_19, KR_21, KR_23, KR_24, KR_25, KR_26, KR_27, KR_28, KR_33, KR_35, KR_48, KR_52