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TCONS_00132105 (lncRNA) and ENST00000338977: detailed information for the interacting components



Function(s) assigned to this lncRNA-RNA interaction (TCONS_00132105 vs ENST00000338977)

Number of records: 9

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
ENST00000338977 zinc finger protein 721 protein coding TCONS_00132105 1149 1065 CDS_UTR Trans
ENST00000338977 zinc finger protein 721 protein coding TCONS_00132105 1135 954 CDS_UTR Trans
ENST00000338977 zinc finger protein 721 protein coding TCONS_00132105 1015 933 CDS_UTR Trans
ENST00000338977 zinc finger protein 721 protein coding TCONS_00132105 869 850 CDS_UTR Trans
ENST00000338977 zinc finger protein 721 protein coding TCONS_00132105 782 819 CDS_UTR Trans
ENST00000338977 zinc finger protein 721 protein coding TCONS_00132105 748 752 CDS_UTR Trans
ENST00000338977 zinc finger protein 721 protein coding TCONS_00132105 693 539 CDS_UTR Trans
ENST00000338977 zinc finger protein 721 protein coding TCONS_00132105 525 552 CDS_UTR Trans
ENST00000338977 zinc finger protein 721 protein coding TCONS_00132105 1713 1659 CDS_UTR Trans

Expression


NOTE: Expression values are provided at the transcript level. Differential expressio analysis was performed at the gene level.


Expression for TCONS_00132105 (lncRNA)Expression for ENST00000338977



Is lncRNA (TCONS_00132105) differentially expressed?
Gene id Direction Adjusted p-value Fold change EBSeq confirmed? edgeR confirmed?
ENSG00000267565 up 0.00377723572661 1.48416 . YES


Is the interacting transcript (ENST00000338977) differentially expressed?
Gene id Direction Adjusted p-value Fold change EBSeq confirmed? edgeR confirmed?
ENSG00000182903 - >0.05 - - -

NOTE: the differential expression results were calculated for KTCN vs non-KTCN samples.
The KTCN samples: KC_15, KC_16, KC_17, KC_18, KC_19, KC_20, KC_21, KC_22, KC_23, KC_25, KC_26, KC_28, KC_30, KC_31, KC_32, KC_34, KC_55
The non-KTCN samples: KR_08, KR_13, KR_14, KR_15, KR_18, KR_19, KR_21, KR_23, KR_24, KR_25, KR_26, KR_27, KR_28, KR_33, KR_35, KR_48, KR_52


Other interactions


All interactions for TCONS_00132105 (lncRNA)All interactions for ENST00000338977