« Back to search



ENST00000579905 (lncRNA) and ENST00000355285: detailed information for the interacting components



Function(s) assigned to this lncRNA-RNA interaction (ENST00000579905 vs ENST00000355285)

Number of records: 1

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
ENST00000355285 adenomatosis polyposis coli down-regulated 1 protein coding ENST00000579905 574 307 UTR3 Trans

Expression


NOTE: Expression values are provided at the transcript level. Differential expressio analysis was performed at the gene level.


Expression for ENST00000579905 (lncRNA)Expression for ENST00000355285



Is lncRNA (ENST00000579905) differentially expressed?
Gene id Direction Adjusted p-value Fold change EBSeq confirmed? edgeR confirmed?
ENSG00000108587 up 0.0000185031487489 1.14272 YES .


Is the interacting transcript (ENST00000355285) differentially expressed?
Gene id Direction Adjusted p-value Fold change EBSeq confirmed? edgeR confirmed?
ENSG00000154856 down 0.0000000000000567407912613 3.72555 YES YES

NOTE: the differential expression results were calculated for KTCN vs non-KTCN samples.
The KTCN samples: KC_15, KC_16, KC_17, KC_18, KC_19, KC_20, KC_21, KC_22, KC_23, KC_25, KC_26, KC_28, KC_30, KC_31, KC_32, KC_34, KC_55
The non-KTCN samples: KR_08, KR_13, KR_14, KR_15, KR_18, KR_19, KR_21, KR_23, KR_24, KR_25, KR_26, KR_27, KR_28, KR_33, KR_35, KR_48, KR_52


Other interactions


All interactions for ENST00000579905 (lncRNA)All interactions for ENST00000355285