« Back to search



ENST00000474641 (lncRNA) and ENST00000370888: detailed information for the interacting components



Function(s) assigned to this lncRNA-RNA interaction (ENST00000474641 vs ENST00000370888)

Number of records: 1

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
ENST00000370888 leucine rich repeat containing 1 protein coding ENST00000474641 718 245 CDS Cis

Expression


NOTE: Expression values are provided at the transcript level. Differential expressio analysis was performed at the gene level.


Expression for ENST00000474641 (lncRNA)Expression for ENST00000370888



Is lncRNA (ENST00000474641) differentially expressed?
Gene id Direction Adjusted p-value Fold change EBSeq confirmed? edgeR confirmed?
ENSG00000271218 - >0.05 - - -


Is the interacting transcript (ENST00000370888) differentially expressed?
Gene id Direction Adjusted p-value Fold change EBSeq confirmed? edgeR confirmed?
ENSG00000137269 down 0.000350686365327 1.41531 . YES

NOTE: the differential expression results were calculated for KTCN vs non-KTCN samples.
The KTCN samples: KC_15, KC_16, KC_17, KC_18, KC_19, KC_20, KC_21, KC_22, KC_23, KC_25, KC_26, KC_28, KC_30, KC_31, KC_32, KC_34, KC_55
The non-KTCN samples: KR_08, KR_13, KR_14, KR_15, KR_18, KR_19, KR_21, KR_23, KR_24, KR_25, KR_26, KR_27, KR_28, KR_33, KR_35, KR_48, KR_52


Other interactions


All interactions for ENST00000474641 (lncRNA)All interactions for ENST00000370888