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TCONS_00143590 (lncRNA) and ENST00000371065: detailed information for the interacting components



Function(s) assigned to this lncRNA-RNA interaction (TCONS_00143590 vs ENST00000371065)

Number of records: 2

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
ENST00000371065 leptin receptor overlapping transcript protein coding TCONS_00143590 755 312 UTR3 Trans
ENST00000371065 leptin receptor overlapping transcript protein coding TCONS_00143590 766 314 UTR3 Trans

Expression


NOTE: Expression values are provided at the transcript level. Differential expressio analysis was performed at the gene level.


Expression for TCONS_00143590 (lncRNA)Expression for ENST00000371065



Is lncRNA (TCONS_00143590) differentially expressed?
Gene id Direction Adjusted p-value Fold change EBSeq confirmed? edgeR confirmed?
ENSG00000173559 down 0.00000000118724437164 2.91388 . YES


Is the interacting transcript (ENST00000371065) differentially expressed?
Gene id Direction Adjusted p-value Fold change EBSeq confirmed? edgeR confirmed?
ENSG00000213625 down 0.000000423918539603 1.45931 YES YES

NOTE: the differential expression results were calculated for KTCN vs non-KTCN samples.
The KTCN samples: KC_15, KC_16, KC_17, KC_18, KC_19, KC_20, KC_21, KC_22, KC_23, KC_25, KC_26, KC_28, KC_30, KC_31, KC_32, KC_34, KC_55
The non-KTCN samples: KR_08, KR_13, KR_14, KR_15, KR_18, KR_19, KR_21, KR_23, KR_24, KR_25, KR_26, KR_27, KR_28, KR_33, KR_35, KR_48, KR_52


Other interactions


All interactions for TCONS_00143590 (lncRNA)All interactions for ENST00000371065