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ENST00000531971 (lncRNA) and ENST00000375290: detailed information for the interacting components



Function(s) assigned to this lncRNA-RNA interaction (ENST00000531971 vs ENST00000375290)

Number of records: 1

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
ENST00000375290 patched 1 nonsense mediated decay ENST00000531971 674 296 UTR3 Trans

Expression


NOTE: Expression values are provided at the transcript level. Differential expressio analysis was performed at the gene level.


Expression for ENST00000531971 (lncRNA)Expression for ENST00000375290



Is lncRNA (ENST00000531971) differentially expressed?
Gene id Direction Adjusted p-value Fold change EBSeq confirmed? edgeR confirmed?
ENSG00000110367 - >0.05 - - -


Is the interacting transcript (ENST00000375290) differentially expressed?
Gene id Direction Adjusted p-value Fold change EBSeq confirmed? edgeR confirmed?
ENSG00000185920 up 0.0000000000085223446681 2.38096 YES YES

NOTE: the differential expression results were calculated for KTCN vs non-KTCN samples.
The KTCN samples: KC_15, KC_16, KC_17, KC_18, KC_19, KC_20, KC_21, KC_22, KC_23, KC_25, KC_26, KC_28, KC_30, KC_31, KC_32, KC_34, KC_55
The non-KTCN samples: KR_08, KR_13, KR_14, KR_15, KR_18, KR_19, KR_21, KR_23, KR_24, KR_25, KR_26, KR_27, KR_28, KR_33, KR_35, KR_48, KR_52


Other interactions


All interactions for ENST00000531971 (lncRNA)All interactions for ENST00000375290