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ENST00000563225 (lncRNA) and ENST00000375846: detailed information for the interacting components



Function(s) assigned to this lncRNA-RNA interaction (ENST00000563225 vs ENST00000375846)

Number of records: 1

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
ENST00000375846 sphingosine-1-phosphate receptor 3 protein coding ENST00000563225 645 289 UTR3 Trans

Expression


NOTE: Expression values are provided at the transcript level. Differential expressio analysis was performed at the gene level.


Expression for ENST00000563225 (lncRNA)Expression for ENST00000375846



Is lncRNA (ENST00000563225) differentially expressed?
Gene id Direction Adjusted p-value Fold change EBSeq confirmed? edgeR confirmed?
ENSG00000261211 - >0.05 - - -


Is the interacting transcript (ENST00000375846) differentially expressed?
Gene id Direction Adjusted p-value Fold change EBSeq confirmed? edgeR confirmed?
ENSG00000213694 up 0.000123219180282 1.68545 YES YES

NOTE: the differential expression results were calculated for KTCN vs non-KTCN samples.
The KTCN samples: KC_15, KC_16, KC_17, KC_18, KC_19, KC_20, KC_21, KC_22, KC_23, KC_25, KC_26, KC_28, KC_30, KC_31, KC_32, KC_34, KC_55
The non-KTCN samples: KR_08, KR_13, KR_14, KR_15, KR_18, KR_19, KR_21, KR_23, KR_24, KR_25, KR_26, KR_27, KR_28, KR_33, KR_35, KR_48, KR_52


Other interactions


All interactions for ENST00000563225 (lncRNA)All interactions for ENST00000375846