« Back to search



TCONS_00203923 (lncRNA) and ENST00000382044: detailed information for the interacting components



Function(s) assigned to this lncRNA-RNA interaction (TCONS_00203923 vs ENST00000382044)

Number of records: 1

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
ENST00000382044 tumor protein p53 binding protein 1 protein coding TCONS_00203923 578 309 UTR3 Trans

Expression


NOTE: Expression values are provided at the transcript level. Differential expressio analysis was performed at the gene level.


Expression for TCONS_00203923 (lncRNA)Expression for ENST00000382044



Is lncRNA (TCONS_00203923) differentially expressed?
Gene id Direction Adjusted p-value Fold change EBSeq confirmed? edgeR confirmed?
ENSG00000164331 up 0.00390129758544 1.223 . .


Is the interacting transcript (ENST00000382044) differentially expressed?
Gene id Direction Adjusted p-value Fold change EBSeq confirmed? edgeR confirmed?
ENSG00000067369 down 0.0000855573181587 1.30941 YES YES

NOTE: the differential expression results were calculated for KTCN vs non-KTCN samples.
The KTCN samples: KC_15, KC_16, KC_17, KC_18, KC_19, KC_20, KC_21, KC_22, KC_23, KC_25, KC_26, KC_28, KC_30, KC_31, KC_32, KC_34, KC_55
The non-KTCN samples: KR_08, KR_13, KR_14, KR_15, KR_18, KR_19, KR_21, KR_23, KR_24, KR_25, KR_26, KR_27, KR_28, KR_33, KR_35, KR_48, KR_52


Other interactions


All interactions for TCONS_00203923 (lncRNA)All interactions for ENST00000382044