ENST00000481349 (lncRNA) and ENST00000392373: detailed information for the interacting components



Function(s) assigned to this lncRNA-RNA interaction (ENST00000481349 vs ENST00000392373)

Number of records: 1

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
ENST00000392373 syntaxin 2 protein coding ENST00000481349 603 275 UTR3 Trans

Expression


NOTE: Expression values are provided at the transcript level. Differential expressio analysis was performed at the gene level.


Expression for ENST00000481349 (lncRNA)Expression for ENST00000392373



Is lncRNA (ENST00000481349) differentially expressed?
Gene id Direction Adjusted p-value Fold change EBSeq confirmed? edgeR confirmed?
ENSG00000242193 up 0.00000000000367793381694 1.73987 YES YES


Is the interacting transcript (ENST00000392373) differentially expressed?
Gene id Direction Adjusted p-value Fold change EBSeq confirmed? edgeR confirmed?
ENSG00000111450 down 2.11031259877e-41 5.58742 YES YES

NOTE: the differential expression results were calculated for KTCN vs non-KTCN samples.
The KTCN samples: KC_15, KC_16, KC_17, KC_18, KC_19, KC_20, KC_21, KC_22, KC_23, KC_25, KC_26, KC_28, KC_30, KC_31, KC_32, KC_34, KC_55
The non-KTCN samples: KR_08, KR_13, KR_14, KR_15, KR_18, KR_19, KR_21, KR_23, KR_24, KR_25, KR_26, KR_27, KR_28, KR_33, KR_35, KR_48, KR_52