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ENST00000602469 (lncRNA) and ENST00000407780: detailed information for the interacting components



Function(s) assigned to this lncRNA-RNA interaction (ENST00000602469 vs ENST00000407780)

Number of records: 1

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
ENST00000407780 inducible T-cell co-stimulator ligand protein coding ENST00000602469 790 428 UTR3 Trans

Expression


NOTE: Expression values are provided at the transcript level. Differential expressio analysis was performed at the gene level.


Expression for ENST00000602469 (lncRNA)Expression for ENST00000407780



Is lncRNA (ENST00000602469) differentially expressed?
Gene id Direction Adjusted p-value Fold change EBSeq confirmed? edgeR confirmed?
ENSG00000185800 down 0.000217438461383 1.57227 YES YES


Is the interacting transcript (ENST00000407780) differentially expressed?
Gene id Direction Adjusted p-value Fold change EBSeq confirmed? edgeR confirmed?
ENSG00000160223 - >0.05 - - -

NOTE: the differential expression results were calculated for KTCN vs non-KTCN samples.
The KTCN samples: KC_15, KC_16, KC_17, KC_18, KC_19, KC_20, KC_21, KC_22, KC_23, KC_25, KC_26, KC_28, KC_30, KC_31, KC_32, KC_34, KC_55
The non-KTCN samples: KR_08, KR_13, KR_14, KR_15, KR_18, KR_19, KR_21, KR_23, KR_24, KR_25, KR_26, KR_27, KR_28, KR_33, KR_35, KR_48, KR_52


Other interactions


All interactions for ENST00000602469 (lncRNA)All interactions for ENST00000407780