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ENST00000490348 (lncRNA) and ENST00000446045: detailed information for the interacting components



Function(s) assigned to this lncRNA-RNA interaction (ENST00000490348 vs ENST00000446045)

Number of records: 1

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
ENST00000446045 AhpC/TSA antioxidant enzyme domain containing 1 protein coding ENST00000490348 607 287 UTR3 Trans

Expression


NOTE: Expression values are provided at the transcript level. Differential expressio analysis was performed at the gene level.


Expression for ENST00000490348 (lncRNA)Expression for ENST00000446045



Is lncRNA (ENST00000490348) differentially expressed?
Gene id Direction Adjusted p-value Fold change EBSeq confirmed? edgeR confirmed?
ENSG00000196220 up 0.00312181997142 1.54108 . YES


Is the interacting transcript (ENST00000446045) differentially expressed?
Gene id Direction Adjusted p-value Fold change EBSeq confirmed? edgeR confirmed?
ENSG00000158122 down 0.000000000000674447910636 2.58181 YES YES

NOTE: the differential expression results were calculated for KTCN vs non-KTCN samples.
The KTCN samples: KC_15, KC_16, KC_17, KC_18, KC_19, KC_20, KC_21, KC_22, KC_23, KC_25, KC_26, KC_28, KC_30, KC_31, KC_32, KC_34, KC_55
The non-KTCN samples: KR_08, KR_13, KR_14, KR_15, KR_18, KR_19, KR_21, KR_23, KR_24, KR_25, KR_26, KR_27, KR_28, KR_33, KR_35, KR_48, KR_52


Other interactions


All interactions for ENST00000490348 (lncRNA)All interactions for ENST00000446045