ENST00000484365 (lncRNA) and ENST00000463496: detailed information for the interacting components



Function(s) assigned to this lncRNA-RNA interaction (ENST00000484365 vs ENST00000463496)

Number of records: 1

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
ENST00000463496 aryl hydrocarbon receptor nonsense mediated decay ENST00000484365 599 290 UTR3 Trans

Expression


NOTE: Expression values are provided at the transcript level. Differential expressio analysis was performed at the gene level.


Expression for ENST00000484365 (lncRNA)Expression for ENST00000463496



Is lncRNA (ENST00000484365) differentially expressed?
Gene id Direction Adjusted p-value Fold change EBSeq confirmed? edgeR confirmed?
ENSG00000163541 up 0.0000010836553236 1.24228 YES YES


Is the interacting transcript (ENST00000463496) differentially expressed?
Gene id Direction Adjusted p-value Fold change EBSeq confirmed? edgeR confirmed?
ENSG00000106546 down 0.0000000000000326035673318 1.75046 YES YES

NOTE: the differential expression results were calculated for KTCN vs non-KTCN samples.
The KTCN samples: KC_15, KC_16, KC_17, KC_18, KC_19, KC_20, KC_21, KC_22, KC_23, KC_25, KC_26, KC_28, KC_30, KC_31, KC_32, KC_34, KC_55
The non-KTCN samples: KR_08, KR_13, KR_14, KR_15, KR_18, KR_19, KR_21, KR_23, KR_24, KR_25, KR_26, KR_27, KR_28, KR_33, KR_35, KR_48, KR_52