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ENST00000416395 (lncRNA) and ENST00000463899: detailed information for the interacting components



Function(s) assigned to this lncRNA-RNA interaction (ENST00000416395 vs ENST00000463899)

Number of records: 1

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
ENST00000463899 N-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase) processed transcript ENST00000416395 500 301 noncoding Trans

Expression


NOTE: Expression values are provided at the transcript level. Differential expressio analysis was performed at the gene level.


Expression for ENST00000416395 (lncRNA)Expression for ENST00000463899



Is lncRNA (ENST00000416395) differentially expressed?
Gene id Direction Adjusted p-value Fold change EBSeq confirmed? edgeR confirmed?
ENSG00000179818 up 0.00344361001874 1.36502 . YES


Is the interacting transcript (ENST00000463899) differentially expressed?
Gene id Direction Adjusted p-value Fold change EBSeq confirmed? edgeR confirmed?
ENSG00000135838 down 0.000013376678654 1.92982 . YES

NOTE: the differential expression results were calculated for KTCN vs non-KTCN samples.
The KTCN samples: KC_15, KC_16, KC_17, KC_18, KC_19, KC_20, KC_21, KC_22, KC_23, KC_25, KC_26, KC_28, KC_30, KC_31, KC_32, KC_34, KC_55
The non-KTCN samples: KR_08, KR_13, KR_14, KR_15, KR_18, KR_19, KR_21, KR_23, KR_24, KR_25, KR_26, KR_27, KR_28, KR_33, KR_35, KR_48, KR_52


Other interactions


All interactions for ENST00000416395 (lncRNA)All interactions for ENST00000463899