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ENST00000548468 (lncRNA) and ENST00000470361: detailed information for the interacting components



Function(s) assigned to this lncRNA-RNA interaction (ENST00000548468 vs ENST00000470361)

Number of records: 1

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
ENST00000470361 potassium large conductance calcium-activated channel, subfamily M, beta member 2 processed transcript ENST00000548468 576 299 noncoding Trans

Expression


NOTE: Expression values are provided at the transcript level. Differential expressio analysis was performed at the gene level.


Expression for ENST00000548468 (lncRNA)Expression for ENST00000470361



Is lncRNA (ENST00000548468) differentially expressed?
Gene id Direction Adjusted p-value Fold change EBSeq confirmed? edgeR confirmed?
ENSG00000272368 - >0.05 - - -


Is the interacting transcript (ENST00000470361) differentially expressed?
Gene id Direction Adjusted p-value Fold change EBSeq confirmed? edgeR confirmed?
ENSG00000197584 up 0.0000855170198924 2.41637 YES YES

NOTE: the differential expression results were calculated for KTCN vs non-KTCN samples.
The KTCN samples: KC_15, KC_16, KC_17, KC_18, KC_19, KC_20, KC_21, KC_22, KC_23, KC_25, KC_26, KC_28, KC_30, KC_31, KC_32, KC_34, KC_55
The non-KTCN samples: KR_08, KR_13, KR_14, KR_15, KR_18, KR_19, KR_21, KR_23, KR_24, KR_25, KR_26, KR_27, KR_28, KR_33, KR_35, KR_48, KR_52


Other interactions


All interactions for ENST00000548468 (lncRNA)All interactions for ENST00000470361