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ENST00000563225 (lncRNA) and ENST00000511480: detailed information for the interacting components



Function(s) assigned to this lncRNA-RNA interaction (ENST00000563225 vs ENST00000511480)

Number of records: 1

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
ENST00000511480 NEDD4 binding protein 2 nonsense mediated decay ENST00000563225 609 306 UTR3 Trans

Expression


NOTE: Expression values are provided at the transcript level. Differential expressio analysis was performed at the gene level.


Expression for ENST00000563225 (lncRNA)Expression for ENST00000511480



Is lncRNA (ENST00000563225) differentially expressed?
Gene id Direction Adjusted p-value Fold change EBSeq confirmed? edgeR confirmed?
ENSG00000261211 - >0.05 - - -


Is the interacting transcript (ENST00000511480) differentially expressed?
Gene id Direction Adjusted p-value Fold change EBSeq confirmed? edgeR confirmed?
ENSG00000078177 down 0.000000226058698011 1.43665 YES YES

NOTE: the differential expression results were calculated for KTCN vs non-KTCN samples.
The KTCN samples: KC_15, KC_16, KC_17, KC_18, KC_19, KC_20, KC_21, KC_22, KC_23, KC_25, KC_26, KC_28, KC_30, KC_31, KC_32, KC_34, KC_55
The non-KTCN samples: KR_08, KR_13, KR_14, KR_15, KR_18, KR_19, KR_21, KR_23, KR_24, KR_25, KR_26, KR_27, KR_28, KR_33, KR_35, KR_48, KR_52


Other interactions


All interactions for ENST00000563225 (lncRNA)All interactions for ENST00000511480