« Back to search



ENST00000506875 (lncRNA) and ENST00000513333: detailed information for the interacting components



Function(s) assigned to this lncRNA-RNA interaction (ENST00000506875 vs ENST00000513333)

Number of records: 1

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
ENST00000513333 erythrocyte membrane protein band 4.1 like 4A processed transcript ENST00000506875 798 271 noncoding Cis

Expression


NOTE: Expression values are provided at the transcript level. Differential expressio analysis was performed at the gene level.


Expression for ENST00000506875 (lncRNA)Expression for ENST00000513333



Is lncRNA (ENST00000506875) differentially expressed?
Gene id Direction Adjusted p-value Fold change EBSeq confirmed? edgeR confirmed?
ENSG00000251187 - >0.05 - - -


Is the interacting transcript (ENST00000513333) differentially expressed?
Gene id Direction Adjusted p-value Fold change EBSeq confirmed? edgeR confirmed?
ENSG00000129595 up 0.000100630784395 1.66008 YES YES

NOTE: the differential expression results were calculated for KTCN vs non-KTCN samples.
The KTCN samples: KC_15, KC_16, KC_17, KC_18, KC_19, KC_20, KC_21, KC_22, KC_23, KC_25, KC_26, KC_28, KC_30, KC_31, KC_32, KC_34, KC_55
The non-KTCN samples: KR_08, KR_13, KR_14, KR_15, KR_18, KR_19, KR_21, KR_23, KR_24, KR_25, KR_26, KR_27, KR_28, KR_33, KR_35, KR_48, KR_52


Other interactions


All interactions for ENST00000506875 (lncRNA)All interactions for ENST00000513333