« Back to search



ENST00000513127 (lncRNA) and ENST00000514920: detailed information for the interacting components



Function(s) assigned to this lncRNA-RNA interaction (ENST00000513127 vs ENST00000514920)

Number of records: 1

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
ENST00000514920 amyloid beta (A4) precursor protein-binding, family B, member 2 protein coding ENST00000513127 1182 399 CDS Cis

Expression


NOTE: Expression values are provided at the transcript level. Differential expressio analysis was performed at the gene level.


Expression for ENST00000513127 (lncRNA)Expression for ENST00000514920



Is lncRNA (ENST00000513127) differentially expressed?
Gene id Direction Adjusted p-value Fold change EBSeq confirmed? edgeR confirmed?
ENSG00000250906 - >0.05 - - -


Is the interacting transcript (ENST00000514920) differentially expressed?
Gene id Direction Adjusted p-value Fold change EBSeq confirmed? edgeR confirmed?
ENSG00000163697 down 6.0631126589e-23 2.55248 YES YES

NOTE: the differential expression results were calculated for KTCN vs non-KTCN samples.
The KTCN samples: KC_15, KC_16, KC_17, KC_18, KC_19, KC_20, KC_21, KC_22, KC_23, KC_25, KC_26, KC_28, KC_30, KC_31, KC_32, KC_34, KC_55
The non-KTCN samples: KR_08, KR_13, KR_14, KR_15, KR_18, KR_19, KR_21, KR_23, KR_24, KR_25, KR_26, KR_27, KR_28, KR_33, KR_35, KR_48, KR_52


Other interactions


All interactions for ENST00000513127 (lncRNA)All interactions for ENST00000514920