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ENST00000494209 (lncRNA) and ENST00000517408: detailed information for the interacting components



Function(s) assigned to this lncRNA-RNA interaction (ENST00000494209 vs ENST00000517408)

Number of records: 1

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
ENST00000517408 antisense antisense ENST00000494209 571 289 noncoding Trans

Expression


NOTE: Expression values are provided at the transcript level. Differential expressio analysis was performed at the gene level.


Expression for ENST00000494209 (lncRNA)Expression for ENST00000517408



Is lncRNA (ENST00000494209) differentially expressed?
Gene id Direction Adjusted p-value Fold change EBSeq confirmed? edgeR confirmed?
ENSG00000172113 up 0.0000000209910175968 1.26261 YES YES


Is the interacting transcript (ENST00000517408) differentially expressed?
Gene id Direction Adjusted p-value Fold change EBSeq confirmed? edgeR confirmed?
ENSG00000253925 - >0.05 - - -

NOTE: the differential expression results were calculated for KTCN vs non-KTCN samples.
The KTCN samples: KC_15, KC_16, KC_17, KC_18, KC_19, KC_20, KC_21, KC_22, KC_23, KC_25, KC_26, KC_28, KC_30, KC_31, KC_32, KC_34, KC_55
The non-KTCN samples: KR_08, KR_13, KR_14, KR_15, KR_18, KR_19, KR_21, KR_23, KR_24, KR_25, KR_26, KR_27, KR_28, KR_33, KR_35, KR_48, KR_52


Other interactions


All interactions for ENST00000494209 (lncRNA)All interactions for ENST00000517408