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ENST00000469873 (lncRNA) and ENST00000521027: detailed information for the interacting components



Function(s) assigned to this lncRNA-RNA interaction (ENST00000469873 vs ENST00000521027)

Number of records: 1

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
ENST00000521027 pleckstrin and Sec7 domain containing 3 protein coding ENST00000469873 509 294 CDS_UTR Trans

Expression


NOTE: Expression values are provided at the transcript level. Differential expressio analysis was performed at the gene level.


Expression for ENST00000469873 (lncRNA)Expression for ENST00000521027



Is lncRNA (ENST00000469873) differentially expressed?
Gene id Direction Adjusted p-value Fold change EBSeq confirmed? edgeR confirmed?
ENSG00000163754 up 0.00187570652427 1.39005 . YES


Is the interacting transcript (ENST00000521027) differentially expressed?
Gene id Direction Adjusted p-value Fold change EBSeq confirmed? edgeR confirmed?
ENSG00000156011 down 0.000000000000103664477388 2.0021 YES YES

NOTE: the differential expression results were calculated for KTCN vs non-KTCN samples.
The KTCN samples: KC_15, KC_16, KC_17, KC_18, KC_19, KC_20, KC_21, KC_22, KC_23, KC_25, KC_26, KC_28, KC_30, KC_31, KC_32, KC_34, KC_55
The non-KTCN samples: KR_08, KR_13, KR_14, KR_15, KR_18, KR_19, KR_21, KR_23, KR_24, KR_25, KR_26, KR_27, KR_28, KR_33, KR_35, KR_48, KR_52


Other interactions


All interactions for ENST00000469873 (lncRNA)All interactions for ENST00000521027