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ENST00000579483 (lncRNA) and ENST00000534281: detailed information for the interacting components



Function(s) assigned to this lncRNA-RNA interaction (ENST00000579483 vs ENST00000534281)

Number of records: 1

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
ENST00000534281 ring finger protein 141 retained intron ENST00000579483 621 270 noncoding Trans

Expression


NOTE: Expression values are provided at the transcript level. Differential expressio analysis was performed at the gene level.


Expression for ENST00000579483 (lncRNA)Expression for ENST00000534281



Is lncRNA (ENST00000579483) differentially expressed?
Gene id Direction Adjusted p-value Fold change EBSeq confirmed? edgeR confirmed?
ENSG00000153944 up 0.00000746075502914 1.84079 YES YES


Is the interacting transcript (ENST00000534281) differentially expressed?
Gene id Direction Adjusted p-value Fold change EBSeq confirmed? edgeR confirmed?
ENSG00000110315 up 0.00000170168532526 1.40742 YES YES

NOTE: the differential expression results were calculated for KTCN vs non-KTCN samples.
The KTCN samples: KC_15, KC_16, KC_17, KC_18, KC_19, KC_20, KC_21, KC_22, KC_23, KC_25, KC_26, KC_28, KC_30, KC_31, KC_32, KC_34, KC_55
The non-KTCN samples: KR_08, KR_13, KR_14, KR_15, KR_18, KR_19, KR_21, KR_23, KR_24, KR_25, KR_26, KR_27, KR_28, KR_33, KR_35, KR_48, KR_52


Other interactions


All interactions for ENST00000579483 (lncRNA)All interactions for ENST00000534281