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ENST00000442383 (lncRNA) and ENST00000549365: detailed information for the interacting components



Function(s) assigned to this lncRNA-RNA interaction (ENST00000442383 vs ENST00000549365)

Number of records: 1

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
ENST00000549365 DNA-damage regulated autophagy modulator 1 nonsense mediated decay ENST00000442383 501 260 CDS_UTR Trans

Expression


NOTE: Expression values are provided at the transcript level. Differential expressio analysis was performed at the gene level.


Expression for ENST00000442383 (lncRNA)Expression for ENST00000549365



Is lncRNA (ENST00000442383) differentially expressed?
Gene id Direction Adjusted p-value Fold change EBSeq confirmed? edgeR confirmed?
ENSG00000223891 up 3.51792305693e-19 2.63864 YES YES


Is the interacting transcript (ENST00000549365) differentially expressed?
Gene id Direction Adjusted p-value Fold change EBSeq confirmed? edgeR confirmed?
ENSG00000136048 down 2.45143949864e-17 4.33128 YES YES

NOTE: the differential expression results were calculated for KTCN vs non-KTCN samples.
The KTCN samples: KC_15, KC_16, KC_17, KC_18, KC_19, KC_20, KC_21, KC_22, KC_23, KC_25, KC_26, KC_28, KC_30, KC_31, KC_32, KC_34, KC_55
The non-KTCN samples: KR_08, KR_13, KR_14, KR_15, KR_18, KR_19, KR_21, KR_23, KR_24, KR_25, KR_26, KR_27, KR_28, KR_33, KR_35, KR_48, KR_52


Other interactions


All interactions for ENST00000442383 (lncRNA)All interactions for ENST00000549365