ENST00000578726 (lncRNA) and ENST00000580666: detailed information for the interacting components



Function(s) assigned to this lncRNA-RNA interaction (ENST00000578726 vs ENST00000580666)

Number of records: 1

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
ENST00000580666 solute carrier family 16, member 6 protein coding ENST00000578726 1304 431 CDS Cis

Expression


NOTE: Expression values are provided at the transcript level. Differential expressio analysis was performed at the gene level.


Expression for ENST00000578726 (lncRNA)Expression for ENST00000580666



Is lncRNA (ENST00000578726) differentially expressed?
Gene id Direction Adjusted p-value Fold change EBSeq confirmed? edgeR confirmed?
ENSG00000141337 up 6.56364574001e-16 1.92181 YES YES


Is the interacting transcript (ENST00000580666) differentially expressed?
Gene id Direction Adjusted p-value Fold change EBSeq confirmed? edgeR confirmed?
ENSG00000108932 up 0.00000480598143771 1.71897 YES YES

NOTE: the differential expression results were calculated for KTCN vs non-KTCN samples.
The KTCN samples: KC_15, KC_16, KC_17, KC_18, KC_19, KC_20, KC_21, KC_22, KC_23, KC_25, KC_26, KC_28, KC_30, KC_31, KC_32, KC_34, KC_55
The non-KTCN samples: KR_08, KR_13, KR_14, KR_15, KR_18, KR_19, KR_21, KR_23, KR_24, KR_25, KR_26, KR_27, KR_28, KR_33, KR_35, KR_48, KR_52