TCONS_00179113 (lncRNA) and ENST00000589403: detailed information for the interacting components



Function(s) assigned to this lncRNA-RNA interaction (TCONS_00179113 vs ENST00000589403)

Number of records: 1

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
ENST00000589403 zinc finger protein 532 processed transcript TCONS_00179113 610 276 noncoding Trans

Expression


NOTE: Expression values are provided at the transcript level. Differential expressio analysis was performed at the gene level.


Expression for TCONS_00179113 (lncRNA)Expression for ENST00000589403



Is lncRNA (TCONS_00179113) differentially expressed?
Gene id Direction Adjusted p-value Fold change EBSeq confirmed? edgeR confirmed?
ENSG00000114784 up 0.000000144570828056 1.5337 YES YES


Is the interacting transcript (ENST00000589403) differentially expressed?
Gene id Direction Adjusted p-value Fold change EBSeq confirmed? edgeR confirmed?
ENSG00000074657 down 1.49337609852e-50 4.31301 YES YES

NOTE: the differential expression results were calculated for KTCN vs non-KTCN samples.
The KTCN samples: KC_15, KC_16, KC_17, KC_18, KC_19, KC_20, KC_21, KC_22, KC_23, KC_25, KC_26, KC_28, KC_30, KC_31, KC_32, KC_34, KC_55
The non-KTCN samples: KR_08, KR_13, KR_14, KR_15, KR_18, KR_19, KR_21, KR_23, KR_24, KR_25, KR_26, KR_27, KR_28, KR_33, KR_35, KR_48, KR_52