ENST00000495237 (lncRNA) and ENST00000591226: detailed information for the interacting components



Function(s) assigned to this lncRNA-RNA interaction (ENST00000495237 vs ENST00000591226)

Number of records: 1

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
ENST00000591226 tropomyosin 4 retained intron ENST00000495237 600 288 noncoding Trans

Expression


NOTE: Expression values are provided at the transcript level. Differential expressio analysis was performed at the gene level.


Expression for ENST00000495237 (lncRNA)Expression for ENST00000591226



Is lncRNA (ENST00000495237) differentially expressed?
Gene id Direction Adjusted p-value Fold change EBSeq confirmed? edgeR confirmed?
ENSG00000121671 up 0.000000000411549963484 1.61069 YES YES


Is the interacting transcript (ENST00000591226) differentially expressed?
Gene id Direction Adjusted p-value Fold change EBSeq confirmed? edgeR confirmed?
ENSG00000167460 down 3.91322757187e-19 2.78451 YES YES

NOTE: the differential expression results were calculated for KTCN vs non-KTCN samples.
The KTCN samples: KC_15, KC_16, KC_17, KC_18, KC_19, KC_20, KC_21, KC_22, KC_23, KC_25, KC_26, KC_28, KC_30, KC_31, KC_32, KC_34, KC_55
The non-KTCN samples: KR_08, KR_13, KR_14, KR_15, KR_18, KR_19, KR_21, KR_23, KR_24, KR_25, KR_26, KR_27, KR_28, KR_33, KR_35, KR_48, KR_52