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ENST00000461952 (lncRNA) and ENST00000615519: detailed information for the interacting components



Function(s) assigned to this lncRNA-RNA interaction (ENST00000461952 vs ENST00000615519)

Number of records: 1

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
ENST00000615519 family with sequence similarity 69, member A protein coding ENST00000461952 1456 523 CDS_UTR Cis

Expression


NOTE: Expression values are provided at the transcript level. Differential expressio analysis was performed at the gene level.


Expression for ENST00000461952 (lncRNA)Expression for ENST00000615519



Is lncRNA (ENST00000461952) differentially expressed?
Gene id Direction Adjusted p-value Fold change EBSeq confirmed? edgeR confirmed?
ENSG00000122406 down 0.000000200374679418 1.42103 YES YES


Is the interacting transcript (ENST00000615519) differentially expressed?
Gene id Direction Adjusted p-value Fold change EBSeq confirmed? edgeR confirmed?
ENSG00000154511 down 0.000131439332361 1.35338 YES YES

NOTE: the differential expression results were calculated for KTCN vs non-KTCN samples.
The KTCN samples: KC_15, KC_16, KC_17, KC_18, KC_19, KC_20, KC_21, KC_22, KC_23, KC_25, KC_26, KC_28, KC_30, KC_31, KC_32, KC_34, KC_55
The non-KTCN samples: KR_08, KR_13, KR_14, KR_15, KR_18, KR_19, KR_21, KR_23, KR_24, KR_25, KR_26, KR_27, KR_28, KR_33, KR_35, KR_48, KR_52


Other interactions


All interactions for ENST00000461952 (lncRNA)All interactions for ENST00000615519