NOTE: Expression values are provided at the
transcript level. Differential expressio analysis was performed at the
gene level.
Expression for TCONS_00188168 (lncRNA)Expression for TCONS_00163352Is lncRNA (
TCONS_00188168) differentially expressed?
| Gene id | Direction | Adjusted p-value | Fold change | EBSeq confirmed? | edgeR confirmed? |
| ENSG00000189157 | up | 0.000000325032632714 | 2.19617 | YES | YES |
Is the interacting transcript (
TCONS_00163352) differentially expressed?
| Gene id | Direction | Adjusted p-value | Fold change | EBSeq confirmed? | edgeR confirmed? |
| ENSG00000159216 | down | 3.98063840271e-26 | 5.2103 | YES | YES |
NOTE: the differential expression results were calculated for KTCN vs non-KTCN samples.
The KTCN samples: KC_15, KC_16, KC_17, KC_18, KC_19, KC_20, KC_21, KC_22, KC_23, KC_25, KC_26, KC_28, KC_30, KC_31, KC_32, KC_34, KC_55
The non-KTCN samples: KR_08, KR_13, KR_14, KR_15, KR_18, KR_19, KR_21, KR_23, KR_24, KR_25, KR_26, KR_27, KR_28, KR_33, KR_35, KR_48, KR_52