NOTE: Expression values are provided at the
transcript level. Differential expressio analysis was performed at the
gene level.
Expression for TCONS_00066683 (lncRNA)Expression for TCONS_00173730Is lncRNA (
TCONS_00066683) differentially expressed?
| Gene id | Direction | Adjusted p-value | Fold change | EBSeq confirmed? | edgeR confirmed? |
| ENSG00000231607 | down | 0.0000472520250248 | 1.90693 | . | YES |
Is the interacting transcript (
TCONS_00173730) differentially expressed?
| Gene id | Direction | Adjusted p-value | Fold change | EBSeq confirmed? | edgeR confirmed? |
| ENSG00000184220 | up | 1.05794157383e-18 | 4.08325 | YES | YES |
NOTE: the differential expression results were calculated for KTCN vs non-KTCN samples.
The KTCN samples: KC_15, KC_16, KC_17, KC_18, KC_19, KC_20, KC_21, KC_22, KC_23, KC_25, KC_26, KC_28, KC_30, KC_31, KC_32, KC_34, KC_55
The non-KTCN samples: KR_08, KR_13, KR_14, KR_15, KR_18, KR_19, KR_21, KR_23, KR_24, KR_25, KR_26, KR_27, KR_28, KR_33, KR_35, KR_48, KR_52