| Potential function | Interacting transcript | Gene description | Transcript biotype | lncRNA id | Alignment score (LAST) | Alignment length | Transcript region involved in interaction | Genomic orientation of interacting RNAs |
|---|---|---|---|---|---|---|---|---|
| ENST00000560870 | sense_intronic | sense intronic | ENST00000335577 | 563 | 275 | noncoding | Trans | |
| ENST00000569832 | SSTR5 antisense RNA 1 | lincRNA | ENST00000335577 | 538 | 265 | noncoding | Trans | |
| TCONS_00030588 | cytoplasmic polyadenylation element binding protein 3 | novel protein coding | ENST00000335577 | 525 | 288 | UTR3 | Trans | |
| TCONS_00033132 | dynein heavy chain domain 1 | novel protein coding | ENST00000335577 | 604 | 273 | UTR3 | Trans | |
| TCONS_00148450 | coiled-coil domain containing 88A | novel protein coding | ENST00000335577 | 606 | 277 | UTR3 | Trans | |
| TCONS_00163367 | runt-related transcription factor 1 | novel protein coding | ENST00000335577 | 625 | 275 | UTR3 | Trans | |
| TCONS_00195633 | aspartylglucosaminidase | novel protein coding | ENST00000335577 | 549 | 274 | UTR3 | Trans | |
| TCONS_00199319 | sorting nexin 24 | novel noncoding | ENST00000335577 | 618 | 282 | noncoding | Trans | |
| TCONS_00204911 | erythrocyte membrane protein band 4.1 like 4A | novel noncoding | ENST00000335577 | 634 | 279 | noncoding | Trans | |
| TCONS_00204916 | erythrocyte membrane protein band 4.1 like 4A | novel protein coding | ENST00000335577 | 634 | 279 | UTR3 | Trans | |
| TCONS_00235281 | NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 | novel protein coding | ENST00000335577 | 619 | 268 | UTR5 | Trans | |
| TCONS_00240688 | metastasis suppressor 1 | novel protein coding | ENST00000335577 | 609 | 277 | UTR5 | Trans | |
| TCONS_00252827 | discs, large homolog 3 (Drosophila) | novel protein coding | ENST00000335577 | 632 | 280 | UTR5 | Trans |
>TCONS_00252827 (509 nt)
TAACAATTTGGACAAGACAGCAAATGCTATTGTCCAAGTTTTCTAAAGAAGAATCTGAAGTGAAATGACATCAAGAGACCTATCAAGACCTGTATCCAGG
AAAAGAGTCTTGCTCTTGTTGCCCAGGCTGGAGTGCAATGGCATGATTTTGGCTCACTGTAAACTCCACCTCCTGGGTTCAAGCGATTCTCCTGCCTCAG
CCTCCCTAGTAGCTGGTATTACAGGTGCCAGCCACCACACCCAGCTAATTTTTGTATTTTTAGTAGAGATGGGGGTTTCACCATGTTGGCCAGCCTGGTC
CCGAACTCCTGACCTTAGGTGATCCACCAGCATCGGCCTCCCAAAGTGCTGGGATTACAGGTGTGAGCCACTGTGTCCAGCCAGTGGTGGGTCTCATATC
TCAATGTGGACTTTTACTAACTCCCAATGCCTCAGTTTCCTCATCAGTTGAAAGGAATGAATGAAAGATATGTGTTTTTCATATTACCAGGTAGATGATA
AGGAGATTTT
In silico ORF/peptide predictions
Nothing found.
RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.