| Potential function | Interacting transcript | Gene description | Transcript biotype | lncRNA id | Alignment score (LAST) | Alignment length | Transcript region involved in interaction | Genomic orientation of interacting RNAs |
|---|---|---|---|---|---|---|---|---|
| ENST00000553936 | gephyrin | nonsense mediated decay | ENST00000366187 | 578 | 268 | CDS_UTR | Trans | |
| ENST00000569455 | cadherin 13 | processed transcript | ENST00000366187 | 539 | 270 | noncoding | Trans | |
| ENST00000604000 | Lix1 homolog (chicken) like | protein coding | ENST00000366187 | 613 | 264 | UTR3 | Trans | |
| TCONS_00033132 | dynein heavy chain domain 1 | novel protein coding | ENST00000366187 | 602 | 264 | UTR5 | Trans | |
| TCONS_00108999 | trans-golgi network vesicle protein 23 homolog C (S. cerevisiae) | novel protein coding | ENST00000366187 | 610 | 264 | UTR5 | Trans | |
| TCONS_00109000 | trans-golgi network vesicle protein 23 homolog C (S. cerevisiae) | novel protein coding | ENST00000366187 | 610 | 264 | UTR5 | Trans | |
| TCONS_00109011 | trans-golgi network vesicle protein 23 homolog C (S. cerevisiae) | novel protein coding | ENST00000366187 | 610 | 264 | UTR3 | Trans | |
| TCONS_00109012 | trans-golgi network vesicle protein 23 homolog C (S. cerevisiae) | novel protein coding | ENST00000366187 | 610 | 264 | UTR3 | Trans | |
| TCONS_00109013 | trans-golgi network vesicle protein 23 homolog C (S. cerevisiae) | novel protein coding | ENST00000366187 | 610 | 264 | UTR3 | Trans | |
| TCONS_00109014 | trans-golgi network vesicle protein 23 homolog C (S. cerevisiae) | novel protein coding | ENST00000366187 | 610 | 264 | UTR3 | Trans | |
| TCONS_00203663 | ribosomal protein L3 pseudogene 6 | novel protein coding | ENST00000366187 | 570 | 248 | UTR3 | Trans | |
| TCONS_00235708 | oxidation resistance 1 | novel protein coding | ENST00000366187 | 605 | 264 | UTR3 | Trans |
>TCONS_00235708 (522 nt)
AGGCAGAGTCTTGCTTTGTTGTCCAGGCTGGTCTTGAACTTCTGAGCTCAAGTGATCCTCCCGCCTTGGCCTCCCAAAGTGCTGAGACTACAGAGAGAGA
ATGCTAACGAGCTGTGAAATGACCAAAGATCTGGCAGCAGAAGGGAAAAGAAAAAATAATGGGTTTGTATATTATACATTCTGGATAATCAGCTCTTGAA
TGATTAAGTGTGGAATACGTCTTACGGGGAAAAGCAGATTTTTAATACTCATTTTGTCCCGGCGCGGTGGGTCACGCCTCTAATCCCAGCACTTTATGGG
AGGCCGAGACAGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCTGTCTCTACTAAAACTACAAAAAAATTAGCCGGGC
TTGGTGGCGGGCGCCTATAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATGGCGTGAACCCAGGAAGTGGAGTTTGCAGTGAGCCAAGATCGCACCA
CTGCACCCCAGTCTGAGCGACTG
In silico ORF/peptide predictions
Nothing found.
RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.