| Potential function | Interacting transcript | Gene description | Transcript biotype | lncRNA id | Alignment score (LAST) | Alignment length | Transcript region involved in interaction | Genomic orientation of interacting RNAs |
|---|---|---|---|---|---|---|---|---|
| ENST00000424496 | sense_intronic | sense intronic | ENST00000366209 | 563 | 244 | noncoding | Trans | |
| TCONS_00039782 | GRAM domain containing 1B | novel protein coding | ENST00000366209 | 611 | 247 | UTR5 | Trans | |
| TCONS_00050741 | spermatogenesis associated, serine-rich 2 | novel protein coding | ENST00000366209 | 605 | 247 | UTR3 | Trans | |
| TCONS_00067572 | DCN1, defective in cullin neddylation 1, domain containing 2 | novel protein coding | ENST00000366209 | 618 | 244 | UTR3 | Trans | |
| TCONS_00116668 | desmoglein 3 | novel protein coding | ENST00000366209 | 518 | 219 | UTR3 | Trans | |
| TCONS_00116668 | desmoglein 3 | novel protein coding | ENST00000366209 | 559 | 245 | UTR3 | Trans | |
| TCONS_00150696 | septin 10 | novel protein coding | ENST00000366209 | 600 | 247 | UTR3 | Trans | |
| TCONS_00165341 | TTC28 antisense RNA 1 | novel protein coding | ENST00000366209 | 600 | 247 | UTR5 | Trans | |
| TCONS_00184373 | neutral cholesterol ester hydrolase 1 | novel protein coding | ENST00000366209 | 615 | 247 | UTR3 | Trans | |
| TCONS_00235205 | epithelial splicing regulatory protein 1 | novel protein coding | ENST00000366209 | 627 | 247 | UTR3 | Trans | |
| TCONS_00235219 | epithelial splicing regulatory protein 1 | novel protein coding | ENST00000366209 | 627 | 247 | UTR3 | Trans | |
| TCONS_00235231 | epithelial splicing regulatory protein 1 | novel protein coding | ENST00000366209 | 627 | 247 | UTR3 | Trans |
>TCONS_00235231 (778 nt)
TGCCACCACGTAAGAAGTGCCTTTTGCCTCCCACCATTATTCTGAGGCCTCCTCAGCCATGTGGAACTGATGACACATCTAGAAGACCCTCACCTTATGC
TTATGCTGGCCCCTTGATCTTGGCCTCCAGAAATGTATAATGAAGAATCTTGAGGTCCTCCTGGATTACCAAAGTGGGCCCTAAATCCAGTGGCAGAAGA
CACAGACACAGAGAGGAGACCAGGTGAAGACAAAAGAAGAGGCTGGAGTGATGCAACCATCAGAGAGTGAAAATACTCAGTTACCTCCTGGTTTATGAGG
CAATGAAGTATTCCAGCACATAAATATTGACGCTGAGACCCATGGGATGTAGGAGTGCTGAGCACATTTGCAAGACATAAAGACCGAAGAGGTGAATCAC
TTCAAAGAGAAGGACCAGATTCTCATGGACCCCACTGCCATGCTGGCCAGACATCTTGCTGCCATTGTTTTCCTGTTATTTACTCCCAAACAGATGGAGT
GTCGCTCTGTCACCCAGGCTGGAGTGCAGTGGCACGATCTCGGCTTACTGCAAGATCTACCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAG
TAGCTGGGACTACAGGCGTCCGCCACCACGCCCGGCTAATTTTTTGTTTTTTTTAGTATAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCAATCTC
CTGACCTCGTGACCCGCCCGCCTTGGCCTCCCAAAGTGAAGTCTCTTTTCAAAATCTTAATGCTTACCTGTGTTTCTTT
In silico ORF/peptide predictions
Nothing found.
RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.