| Potential function | Interacting transcript | Gene description | Transcript biotype | lncRNA id | Alignment score (LAST) | Alignment length | Transcript region involved in interaction | Genomic orientation of interacting RNAs |
|---|---|---|---|---|---|---|---|---|
| ENST00000327473 | tumor necrosis factor, alpha-induced protein 8-like 1 | protein coding | ENST00000366321 | 603 | 261 | UTR3 | Trans | |
| ENST00000424496 | sense_intronic | sense intronic | ENST00000366321 | 593 | 260 | noncoding | Trans | |
| ENST00000439138 | transmembrane protein 98 | protein coding | ENST00000366321 | 533 | 266 | UTR5 | Trans | |
| ENST00000482603 | glyoxylate reductase/hydroxypyruvate reductase | processed transcript | ENST00000366321 | 565 | 263 | noncoding | Trans | |
| ENST00000498813 | delta(4)-desaturase, sphingolipid 1 | processed transcript | ENST00000366321 | 543 | 275 | noncoding | Trans | |
| ENST00000513143 | podoplanin | protein coding | ENST00000366321 | 530 | 265 | UTR5 | Trans | |
| ENST00000552918 | spermatogenesis associated, serine-rich 2 | protein coding | ENST00000366321 | 600 | 257 | UTR3 | Trans | |
| ENST00000553127 | spermatogenesis associated, serine-rich 2 | protein coding | ENST00000366321 | 600 | 257 | UTR3 | Trans | |
| TCONS_00020768 | processed_transcript | novel protein coding | ENST00000366321 | 602 | 265 | UTR5 | Trans | |
| TCONS_00030591 | cytoplasmic polyadenylation element binding protein 3 | novel protein coding | ENST00000366321 | 609 | 263 | UTR3 | Trans | |
| TCONS_00039782 | GRAM domain containing 1B | novel protein coding | ENST00000366321 | 616 | 261 | UTR5 | Trans | |
| TCONS_00041296 | RIC3 acetylcholine receptor chaperone | novel protein coding | ENST00000366321 | 633 | 267 | UTR3 | Trans | |
| TCONS_00041298 | RIC3 acetylcholine receptor chaperone | novel protein coding | ENST00000366321 | 633 | 267 | UTR3 | Trans | |
| TCONS_00050741 | spermatogenesis associated, serine-rich 2 | novel protein coding | ENST00000366321 | 600 | 257 | UTR3 | Trans | |
| TCONS_00095053 | epithelial membrane protein 2 | novel protein coding | ENST00000366321 | 518 | 256 | UTR3 | Trans | |
| TCONS_00108999 | trans-golgi network vesicle protein 23 homolog C (S. cerevisiae) | novel protein coding | ENST00000366321 | 620 | 263 | UTR5 | Trans | |
| TCONS_00109000 | trans-golgi network vesicle protein 23 homolog C (S. cerevisiae) | novel protein coding | ENST00000366321 | 620 | 263 | UTR5 | Trans | |
| TCONS_00109009 | trans-golgi network vesicle protein 23 homolog C (S. cerevisiae) | novel protein coding | ENST00000366321 | 620 | 263 | UTR5 | Trans | |
| TCONS_00109011 | trans-golgi network vesicle protein 23 homolog C (S. cerevisiae) | novel protein coding | ENST00000366321 | 620 | 263 | UTR5 | Trans | |
| TCONS_00109012 | trans-golgi network vesicle protein 23 homolog C (S. cerevisiae) | novel protein coding | ENST00000366321 | 620 | 263 | UTR5 | Trans | |
| TCONS_00109013 | trans-golgi network vesicle protein 23 homolog C (S. cerevisiae) | novel protein coding | ENST00000366321 | 620 | 263 | UTR5 | Trans | |
| TCONS_00109014 | trans-golgi network vesicle protein 23 homolog C (S. cerevisiae) | novel protein coding | ENST00000366321 | 620 | 263 | UTR5 | Trans | |
| TCONS_00116668 | desmoglein 3 | novel protein coding | ENST00000366321 | 608 | 269 | UTR3 | Trans | |
| TCONS_00116668 | desmoglein 3 | novel protein coding | ENST00000366321 | 539 | 265 | UTR3 | Trans | |
| TCONS_00118919 | potassium channel tetramerization domain containing 1 | novel protein coding | ENST00000366321 | 620 | 262 | UTR3 | Trans | |
| TCONS_00123889 | ribosomal protein SA pseudogene 58 | novel protein coding | ENST00000366321 | 611 | 263 | UTR5 | Trans | |
| TCONS_00123899 | ribosomal protein SA pseudogene 58 | novel protein coding | ENST00000366321 | 611 | 263 | UTR5 | Trans | |
| TCONS_00124891 | zinc finger protein 540 | novel protein coding | ENST00000366321 | 613 | 273 | UTR5 | Trans |
>TCONS_00124891 (581 nt)
ACCTTCTCTGAGCACTAGCTGGAACACGGCGGCTCTTCTTTCTTCCACTCTGAGACAAGAACACATGCGCTTTTCCTAGTTTCGCTCTTGTGGCCCAGTC
TGGAGTGCAGTGGCACCATCTCAGCTCATTGCAACCTCCGCCTCCCCGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGGCAC
CCGCCACCATGCCCAGCTAAGTTTTTGTATTTTTAGTAGAGACGGGGTTTCGCCATGTTAGCCAGGATGGTCTCGAGGTCCTGACCTCGTGATCTGCCCA
CCTCAGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCCCGCCCGGGCAATTTGTAAATTTTTAAGAAACGCCCTTTGTTGTACACAAATTAGACT
TCAATAAAGTTAGCCTTAAAACAGAAAACTAGAGGAAAGGAGAACTGGCTCAAATTTTCTGTACTTTTCTCCTGTAACCACCCCTCATTTCCTCCTTGAG
CTGTCTCCCTGTCATGTGAACATGGTCGTCAACGAGTGGCTTCTATAATTGCTCAGACTATCTTTCCCTCAACTGAATTCCT
In silico ORF/peptide predictions
Nothing found.
RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.