| Potential function | Interacting transcript | Gene description | Transcript biotype | lncRNA id | Alignment score (LAST) | Alignment length | Transcript region involved in interaction | Genomic orientation of interacting RNAs |
|---|---|---|---|---|---|---|---|---|
| ENST00000257287 | centrosomal protein 135kDa | protein coding | ENST00000366397 | 603 | 293 | UTR3 | Trans | |
| ENST00000506202 | centrosomal protein 135kDa | retained intron | ENST00000366397 | 603 | 293 | noncoding | Trans | |
| ENST00000560870 | sense_intronic | sense intronic | ENST00000366397 | 551 | 269 | noncoding | Trans | |
| TCONS_00057601 | transcribed_unprocessed_pseudogene | novel protein coding | ENST00000366397 | 543 | 293 | UTR3 | Trans | |
| TCONS_00195633 | aspartylglucosaminidase | novel protein coding | ENST00000366397 | 544 | 266 | UTR3 | Trans | |
| TCONS_00240688 | metastasis suppressor 1 | novel protein coding | ENST00000366397 | 602 | 290 | UTR5 | Trans |
>TCONS_00240688 (541 nt)
CATCTCTTTTGCATTTTTTTTCCTTTGTGAGGTAAAGCAGCATTTTCCTGGCTACTCTGACTTTGCTCATGAGAAATAGTCTCATTACTATGAATGAAAT
GTGTGGGGATCTGATCTCTTCTAACAGCTCAGGAGTCTTTTTTTCTGAGATAGGGTTTCTCTCTGTTGCCTAGGCTGGAGTACAGTGGTGTGATCATGGC
TAACTGTAGCCTCGAACTCCTGGGCTCAAGTCATCCTCCTGCCTCAGCCTCCCGATAGCTGGGATTAAAGGTGCCTGCCACCACACTCAGCTAATTTTTG
TATTTTTAGTAGACATGGGGTTTCACCACATTGGCCACGCTGGTCTCGAACTCCTGACCTCAAGTGATCTGCCTGCCTCGGCCTCCCAAAGTGCTGGGAT
TACAGGTGTGAGCCACTGCGCCTGGCCTAGCATCGTATTTTTGAGGTTAGCCTTGCCTATTTAAAAATGTTTTGATATCTTTTTAAATCTATGGGTTCCC
CCTCCACCCCTTTCTTTCAAGTTATCTGTTGAAGAAGTTGGG
In silico ORF/peptide predictions
Nothing found.
RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.