Detailed information on ENST00000394114

lncRNA-RNA interactions

Number of interactions: 1

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
TCONS_00095053 epithelial membrane protein 2 novel protein coding ENST00000394114 553 248 UTR3 Trans

Sequence

>TCONS_00095053 (2791 nt)
GTTTTTCTAGATACACATTCTTTAATTCAGACAGGAATGTGGTATGGGGAGAATGCTAAAGGAATTTGAGAGAACATTTTCAGTGCCACTGATTTGTATG
TGACACCAAGACGCCTCTTAGTGGTCAGGAGCTGGAAATGCAGCTTATGTAATGCCCATCATCTTTATTCTTTTCAGTTTTTTTCTCCGTTGCCCAGGCT
TGGAGTGCAGTGGCGTGATCTCGGTTCACTGTAACCTCCACCTCTTGGGTTCAAGCGATTCTTCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGTGCC
TGCCACCATGCCCGGCTAGTTTTTGTATTTCTAGTAGAGATGGCGTTTCACCATGTTGGCCAAGCTGGTCTCAAACTCCTGACCTCAACCGATCCACCTG
CCTCGGCCTCCGAAAGTGCTGGGATTACAGGCATAAGCCACCGCACCCAGCGTTCAGTTTCTTTAATGGTGTTTCTTTCCTGTGTTGTGGTACATCATAG
GTGGCAATACCTGGTTTTTACTCTATTGCATAAAGAAGCTGTATTCTACTCCTTATCACCCCTACCTCTGTCCTGCTTAACTTCCACCACGTTGACATAA
TCAAGTATCTGTAGTGTCGCTACTGAACTCAGCCTTTTCCATTTGTCAGCTGATGGTAGGAATTAGAGAAAGCTGGGCAGTACTTTGAAGAAATAAAAAC
CAGAGCATAATAATGAAGAATTAAGGCAAAAATGAATAGTCACTTTATTTTGAAGGGTGGGCAGATTAGATATTTTTAAAATTATAAATTCCCCAATTCT
CTTATGGCTGAATAATATTTCCTGTTCATCATAGGTTGGATGAATTCATTCCTAACTTTTTCTTCTCCTGGCTTGTGGGGTCCCAGGCCCCATCACAGGT
ATATGGAGGAGTGACCTACTATAACCCCGCCCAGCAGCAGGTGCAGCCAAAGCCCTCCCCACCCCGGAGGACTCCCCAGCCAGTCACCATCAAGCCCCCT
CCACCTGAGGTTGTAAGCAGGGGTTCCAGTTAATACAAGTTTCTGAATATTTTAAATCTTAACATCATATAAAAAGCAGCAGAGGTGAGAACTCAGAAGA
GAAATACAGCTGGCTATCTACTACCAGAAGGGCTTCAAAGATATAGGGTGTGGCTCCTACCAGCAAACAGCTGAAAGAGGAGGACCCCTGCCTTCCTCTG
AGGACAGGCTCTAGAGAGAGGGAGAAACAAGTGGACCTCGTCCCATCTTCACTCTTCACTTGAGTTGGCTGTGTTCGGGGGAGCAGAGAGAGCCAGACAG
CCCCAAGCTTCTGAGTCTAGATACAGAAGCCCATGTCTTCTGCTGTTCTTCACTTCTGGGAAATTGAAGTGTCTTCTGTTCCCAAGGAAGCTCCTTCCTG
TTTGTTTTGTTTTCTAAGATGTTCATTTTTAAAGCCTGGCTTCTTATCCTTAATATTATTTTAATTTTTTCTCTTTGTTTCTGTTTCTTGCTCTCTCTCC
CTGCCTTTAAATGAAACAAGTCTAGTCTTCTGGTTTTCTAGCCCCTCTGGATTCCCTTTTGACTCTTCCGTGCATCCCAGATAATGGAGAATGTATCAGC
CAGCCTTCCCCACCAAGTCTAAAAAGACCTGGCCTTTCACTTTTAGTTGGCATTTGTTATCCTCTTGTATACTTGTATTCCCTTAACTCTAACCCTGTGG
AAGCATGGCTGTCTGCACAGAGGGTCCCATTGTGCAGAAAAGCTCAGAGTAGGTGGGTAGGAGCCCTTCTCTTTGACTTAGGTTTTTAGGAGTCTGAGCA
TCCATCAATACCTGTACTATGATGGGCTTCTGTTCTCTGCTGAGGGCCAATACCCTACTGTGGGGAGAGATGGCACACCAGATGCTTTTGTGAGAAAGGG
ATGGTGGAGTGAGAGCCTTTGCCTTTAGGGGTGTGTATTCACATAGTCCTCAGGGCTCAGTCTTTTGAGGTAAGTGGAATTAGAGGGCCTTGCTTCTCTT
CTTTCCATTCTTCTTGCTACACCCCTTTTCCAGTTGCTGTGGACCAATGCATCTCTTTAAAGGCAAATATTATCCAGCAAGCAGTCTACCCTGTCCTTTG
CAATTGCTCTTCTCCACGTCTTTCCTGCTACAAGTGTTTTAGATGTTACTACCTTATTTTCCCCGAATTCTATTTTTGTCCTTGCAGACAGAATATAAAA
ACTCCTGGGCTTAAGGCCTAAGGAAGCCAGTCACCTTCTGGGCAAGGGCTCCTATCTTTCCTCCCTATCCATGGCACTAAACCACTTCTCTGCTGCCTCT
GTGGAAGAGATTCCTATTACTGCAGTACATACGTCTGCCAGGGGTAACCTGGCCACTGTCCCTGTCCTTCTACAGAACCTGAGGGCAAAGATGGTGGCTG
TGTCTCTCCCCGGTAATGTCACTGTTTTTATTCCTTCCATCTAGCAGCTGGCCTAATCACTCTGAGTCACAGGTGTGGGATGGAGAGTGGGGAGAGGCAC
TTAATCTGTAACCCCCAAGGAGGAAATAACTAAGAGATTCTTCTAGGGGTAGCTGGTGGTTGTGCCTTTTGTAGGCTGTTCCCTTTGCCTTAAACCTGAA
GATGTCTCCTCAAGCCTGTGGGCAGCATGCCCAGATTCCCAGACCTTAAGACACTGTGAGAGTTGTCTCTGTTGGTCCACTGTGTTTAGTTGCAAGGATT
TTTCCATGTGTGGTGGTGTTTTTTGTTACTGTTTTAAAGGGTGCCCATTTGTGATCAGCATTGTGACTTGGAGATAATAAAATTTAGACTAT

Expression



Full and truncated open reading frames discovered in TCONS_00095053

In silico ORF/peptide predictions
Nothing found.


RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.

BLAST search results

No hits found.