| Potential function | Interacting transcript | Gene description | Transcript biotype | lncRNA id | Alignment score (LAST) | Alignment length | Transcript region involved in interaction | Genomic orientation of interacting RNAs |
|---|---|---|---|---|---|---|---|---|
| ENST00000524264 | SAP30L antisense RNA 1 (head to head) | antisense | ENST00000394793 | 619 | 234 | noncoding | Trans | |
| ENST00000549365 | DNA-damage regulated autophagy modulator 1 | nonsense mediated decay | ENST00000394793 | 509 | 236 | UTR3 | Trans | |
| TCONS_00135884 | zinc finger protein 347 | novel protein coding | ENST00000394793 | 589 | 232 | UTR5 | Trans |
>TCONS_00135884 (534 nt)
AGGAAGAGAAAAGGGGAAGGAGCGTCTAGGTGAAATGAGCTGTGTAGTCCTTTAGAGCCTCTGGACAGAAGGTCTGATGAATACATGTAAAGCTTATTGA
GCCTCAGAACTCTAACTACAGGGTTTCAATAGCACAGAAACTCTGAGAAGAAAAAGAATGTCAAAGTTCCTCCCTAAGGAGACTGATTAGATGCAAGTGT
GTCCGGAATTGGTGGGTTCTTGGTCTGACTTCAAGAATGAAGCCGCGGACCCTCACGGTGCTGCTGTTTTACTAAGAGGTATATGAATAATGGAAATGCC
TCCTGTAATCCTAGCACTTTGGGAGGCCGAGGCGGGCGGATCACCTGAGGTTGGGAGTTCGAGACCAGCCTGACCAACATGGGGAAACCCCCTCTCTACT
AAAAATACAAAATTAGCTGGGCGTGGTGGTCCATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGGAGGCGGAGGTT
GAGGTGAGCCGAGATCATGCCATTGCACTGTAGCC
In silico ORF/peptide predictions
Nothing found.
RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.