| Potential function | Interacting transcript | Gene description | Transcript biotype | lncRNA id | Alignment score (LAST) | Alignment length | Transcript region involved in interaction | Genomic orientation of interacting RNAs |
|---|---|---|---|---|---|---|---|---|
| TCONS_00030591 | cytoplasmic polyadenylation element binding protein 3 | novel protein coding | ENST00000398953 | 619 | 407 | UTR3 | Trans | |
| TCONS_00065864 | long intergenic non-protein coding RNA 412 | novel protein coding | ENST00000398953 | 687 | 394 | UTR3 | Trans | |
| TCONS_00095053 | epithelial membrane protein 2 | novel protein coding | ENST00000398953 | 555 | 346 | UTR3 | Trans | |
| TCONS_00195633 | aspartylglucosaminidase | novel protein coding | ENST00000398953 | 501 | 256 | UTR3 | Trans |
>TCONS_00195633 (481 nt)
GGCTGGAGTGCAATAGTGTGATCTCAGCTCACTGCAACCTCCGCCTCCTGGGCTCAAGCAATCCTCTCACCTCAGCCTCCTGAGTAGCTGGGTCTACAGG
CGTGCACCACCATGCCCAGCTAATTTTTGTATTTTTTGTAGAGATGAGGTTTTGCCATGTTGGCCAGGCTGGTCTCAAACTCCTGAGCTCAAGTAATCAA
CCCACTTCGGCCTCCCAAAGTGCTGGAATTACAGGTGTGAGCCACTGTGCCCGGCCACCTGCCTCCTTTTTTGGGAGGCCGACAGGGTCTCACTCTGTTG
GCCAGGCTGGGGGGCAGTGGCGCCATCATAACTCACTGTAGCCTCGACCTCCTGGGCTCAGGCGATCCTCCTGCCTCAGCTTCCCGAGTAGCTGTGTCTC
CAGTGGAATCCTTCGAGGAGGTGGAGGACAGCCTGTGTGTCCCCCAGTATAACAAGTACAGGGAGGAGAGGGTGATCCTCTT
In silico ORF/peptide predictions
Nothing found.
RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.