Potential function |
Interacting transcript |
Gene description |
Transcript biotype |
lncRNA id |
Alignment score (LAST) |
Alignment length |
Transcript region involved in interaction |
Genomic orientation of interacting RNAs |
|
ENST00000261839 |
myosin VC |
protein coding |
ENST00000411553 |
607 |
306 |
UTR3 |
Trans |
|
ENST00000324537 |
SH3-domain GRB2-like 3 |
protein coding |
ENST00000411553 |
549 |
298 |
UTR5 |
Trans |
|
ENST00000338758 |
parvin, beta |
protein coding |
ENST00000411553 |
648 |
292 |
UTR3 |
Trans |
|
ENST00000338758 |
parvin, beta |
protein coding |
ENST00000411553 |
632 |
261 |
UTR3 |
Trans |
|
ENST00000357491 |
zinc finger protein 43 |
protein coding |
ENST00000411553 |
609 |
280 |
UTR3 |
Trans |
|
ENST00000357613 |
transmembrane protein 170A |
protein coding |
ENST00000411553 |
618 |
280 |
UTR3 |
Trans |
|
ENST00000375120 |
OTU deubiquitinase 3 |
protein coding |
ENST00000411553 |
619 |
300 |
UTR3 |
Trans |
|
ENST00000381431 |
sarcoglycan, beta (43kDa dystrophin-associated glycoprotein) |
protein coding |
ENST00000411553 |
605 |
294 |
UTR3 |
Trans |
|
ENST00000399120 |
holocarboxylase synthetase (biotin-(proprionyl-CoA-carboxylase (ATP-hydrolysing)) ligase) |
protein coding |
ENST00000411553 |
544 |
300 |
UTR5 |
Trans |
|
ENST00000427746 |
holocarboxylase synthetase (biotin-(proprionyl-CoA-carboxylase (ATP-hydrolysing)) ligase) |
protein coding |
ENST00000411553 |
544 |
300 |
UTR5 |
Trans |
|
ENST00000448612 |
WD repeat domain 27 |
protein coding |
ENST00000411553 |
600 |
287 |
CDS |
Trans |
|
ENST00000467462 |
inter-alpha-trypsin inhibitor heavy chain family, member 4 |
processed transcript |
ENST00000411553 |
528 |
299 |
noncoding |
Trans |
|
ENST00000475187 |
THO complex 5 |
retained intron |
ENST00000411553 |
514 |
301 |
noncoding |
Trans |
|
ENST00000475187 |
THO complex 5 |
retained intron |
ENST00000411553 |
551 |
282 |
noncoding |
Trans |
|
ENST00000511184 |
E74-like factor 2 (ets domain transcription factor) |
nonsense mediated decay |
ENST00000411553 |
622 |
303 |
CDS_UTR |
Trans |
|
ENST00000568559 |
transmembrane protein 170A |
nonsense mediated decay |
ENST00000411553 |
618 |
280 |
UTR3 |
Trans |
|
ENST00000569540 |
transmembrane protein 170A |
protein coding |
ENST00000411553 |
618 |
280 |
UTR3 |
Trans |
|
ENST00000588483 |
tropomyosin 4 |
protein coding |
ENST00000411553 |
588 |
295 |
UTR5 |
Trans |
|
ENST00000588483 |
tropomyosin 4 |
protein coding |
ENST00000411553 |
590 |
279 |
UTR5 |
Trans |
|
ENST00000593250 |
centrosomal protein 76kDa |
nonsense mediated decay |
ENST00000411553 |
508 |
296 |
UTR3 |
Trans |
|
ENST00000594012 |
zinc finger protein 43 |
protein coding |
ENST00000411553 |
609 |
280 |
UTR3 |
Trans |
|
ENST00000604000 |
Lix1 homolog (chicken) like |
protein coding |
ENST00000411553 |
563 |
295 |
UTR3 |
Trans |
|
ENST00000607772 |
CNKSR family member 3 |
protein coding |
ENST00000411553 |
621 |
275 |
UTR3 |
Trans |
|
ENST00000620139 |
melanoregulin |
protein coding |
ENST00000411553 |
609 |
279 |
UTR3 |
Trans |
|
TCONS_00001594 |
lincRNA |
novel protein coding |
ENST00000411553 |
620 |
281 |
UTR5 |
Trans |
|
TCONS_00030130 |
calcium/calmodulin-dependent protein kinase II gamma |
novel protein coding |
ENST00000411553 |
636 |
277 |
UTR3 |
Trans |
|
TCONS_00050195 |
FYVE, RhoGEF and PH domain containing 4 |
novel protein coding |
ENST00000411553 |
644 |
300 |
UTR5 |
Trans |
|
TCONS_00053851 |
transmembrane protein 263 |
novel protein coding |
ENST00000411553 |
616 |
285 |
UTR3 |
Trans |
|
TCONS_00053851 |
transmembrane protein 263 |
novel protein coding |
ENST00000411553 |
634 |
257 |
UTR3 |
Trans |
|
TCONS_00061878 |
transmembrane protein 116 |
novel protein coding |
ENST00000411553 |
645 |
294 |
UTR3 |
Trans |
|
TCONS_00067572 |
DCN1, defective in cullin neddylation 1, domain containing 2 |
novel protein coding |
ENST00000411553 |
602 |
285 |
UTR3 |
Trans |
|
TCONS_00075813 |
forkhead box N3 |
novel protein coding |
ENST00000411553 |
657 |
284 |
UTR5 |
Trans |
|
TCONS_00075827 |
forkhead box N3 |
novel protein coding |
ENST00000411553 |
657 |
284 |
UTR3 |
Trans |
|
TCONS_00083747 |
myosin VC |
novel protein coding |
ENST00000411553 |
607 |
306 |
UTR3 |
Trans |
|
TCONS_00098745 |
transmembrane protein 170A |
novel protein coding |
ENST00000411553 |
618 |
280 |
UTR3 |
Trans |
|
TCONS_00107851 |
transient receptor potential cation channel, subfamily V, member 1 |
novel protein coding |
ENST00000411553 |
620 |
280 |
UTR5 |
Trans |
|
TCONS_00107864 |
transient receptor potential cation channel, subfamily V, member 1 |
novel protein coding |
ENST00000411553 |
620 |
280 |
UTR3 |
Trans |
|
TCONS_00107864 |
transient receptor potential cation channel, subfamily V, member 1 |
novel protein coding |
ENST00000411553 |
617 |
281 |
UTR3 |
Trans |
|
TCONS_00107864 |
transient receptor potential cation channel, subfamily V, member 1 |
novel protein coding |
ENST00000411553 |
644 |
275 |
UTR3 |
Trans |
|
TCONS_00107867 |
transient receptor potential cation channel, subfamily V, member 1 |
novel protein coding |
ENST00000411553 |
617 |
281 |
UTR3 |
Trans |
|
TCONS_00107867 |
transient receptor potential cation channel, subfamily V, member 1 |
novel protein coding |
ENST00000411553 |
644 |
275 |
UTR3 |
Trans |
|
TCONS_00108999 |
trans-golgi network vesicle protein 23 homolog C (S. cerevisiae) |
novel protein coding |
ENST00000411553 |
617 |
280 |
UTR5 |
Trans |
|
TCONS_00109000 |
trans-golgi network vesicle protein 23 homolog C (S. cerevisiae) |
novel protein coding |
ENST00000411553 |
617 |
280 |
UTR5 |
Trans |
|
TCONS_00109009 |
trans-golgi network vesicle protein 23 homolog C (S. cerevisiae) |
novel protein coding |
ENST00000411553 |
617 |
280 |
UTR5 |
Trans |
|
TCONS_00109011 |
trans-golgi network vesicle protein 23 homolog C (S. cerevisiae) |
novel protein coding |
ENST00000411553 |
617 |
280 |
UTR5 |
Trans |
|
TCONS_00109012 |
trans-golgi network vesicle protein 23 homolog C (S. cerevisiae) |
novel protein coding |
ENST00000411553 |
617 |
280 |
UTR5 |
Trans |
|
TCONS_00109013 |
trans-golgi network vesicle protein 23 homolog C (S. cerevisiae) |
novel protein coding |
ENST00000411553 |
617 |
280 |
UTR5 |
Trans |
|
TCONS_00109014 |
trans-golgi network vesicle protein 23 homolog C (S. cerevisiae) |
novel protein coding |
ENST00000411553 |
617 |
280 |
UTR5 |
Trans |
|
TCONS_00119512 |
zinc finger and BTB domain containing 7C |
novel protein coding |
ENST00000411553 |
579 |
302 |
UTR3 |
Trans |
|
TCONS_00123889 |
ribosomal protein SA pseudogene 58 |
novel protein coding |
ENST00000411553 |
620 |
269 |
UTR5 |
Trans |
|
TCONS_00123899 |
ribosomal protein SA pseudogene 58 |
novel protein coding |
ENST00000411553 |
620 |
269 |
UTR5 |
Trans |
|
TCONS_00124891 |
zinc finger protein 540 |
novel protein coding |
ENST00000411553 |
664 |
291 |
UTR3 |
Trans |
|
TCONS_00124891 |
zinc finger protein 540 |
novel protein coding |
ENST00000411553 |
665 |
284 |
UTR3 |
Trans |
|
TCONS_00132233 |
zinc finger protein 43 |
novel protein coding |
ENST00000411553 |
609 |
280 |
UTR3 |
Trans |
|
TCONS_00132247 |
zinc finger protein 43 |
novel noncoding |
ENST00000411553 |
608 |
259 |
noncoding |
Trans |
|
TCONS_00132247 |
zinc finger protein 43 |
novel noncoding |
ENST00000411553 |
601 |
282 |
noncoding |
Trans |
|
TCONS_00135884 |
zinc finger protein 347 |
novel protein coding |
ENST00000411553 |
550 |
264 |
UTR5 |
Trans |
|
TCONS_00147100 |
ATPase family, AAA domain containing 2B |
novel protein coding |
ENST00000411553 |
611 |
271 |
UTR3 |
Trans |
|
TCONS_00147113 |
ATPase family, AAA domain containing 2B |
novel protein coding |
ENST00000411553 |
611 |
271 |
UTR3 |
Trans |
|
TCONS_00147115 |
ATPase family, AAA domain containing 2B |
novel protein coding |
ENST00000411553 |
611 |
271 |
UTR3 |
Trans |
|
TCONS_00148698 |
WD repeat containing planar cell polarity effector |
novel noncoding |
ENST00000411553 |
641 |
269 |
noncoding |
Trans |
|
TCONS_00148704 |
WD repeat containing planar cell polarity effector |
novel protein coding |
ENST00000411553 |
641 |
269 |
UTR3 |
Trans |
|
TCONS_00148705 |
WD repeat containing planar cell polarity effector |
novel protein coding |
ENST00000411553 |
641 |
269 |
UTR3 |
Trans |
|
TCONS_00168418 |
dual specificity phosphatase 18 |
novel protein coding |
ENST00000411553 |
626 |
279 |
UTR5 |
Trans |
|
TCONS_00173724 |
cms1 ribosomal small subunit homolog (yeast) |
novel protein coding |
ENST00000411553 |
605 |
276 |
UTR5 |
Trans |
|
TCONS_00173729 |
cms1 ribosomal small subunit homolog (yeast) |
novel protein coding |
ENST00000411553 |
605 |
276 |
UTR5 |
Trans |
|
TCONS_00184373 |
neutral cholesterol ester hydrolase 1 |
novel protein coding |
ENST00000411553 |
613 |
280 |
UTR3 |
Trans |
|
TCONS_00185321 |
transferrin receptor |
novel protein coding |
ENST00000411553 |
620 |
280 |
UTR5 |
Trans |
|
TCONS_00190276 |
transmembrane protein 144 |
novel protein coding |
ENST00000411553 |
627 |
281 |
UTR3 |
Trans |
|
TCONS_00194682 |
E74-like factor 2 (ets domain transcription factor) |
novel protein coding |
ENST00000411553 |
622 |
303 |
UTR3 |
Trans |
|
TCONS_00194686 |
E74-like factor 2 (ets domain transcription factor) |
novel protein coding |
ENST00000411553 |
622 |
303 |
UTR3 |
Trans |
|
TCONS_00202828 |
myotubularin related protein 12 |
novel protein coding |
ENST00000411553 |
629 |
283 |
UTR3 |
Trans |
|
TCONS_00213191 |
tubby like protein 4 |
novel protein coding |
ENST00000411553 |
655 |
284 |
UTR5 |
Trans |
|
TCONS_00222403 |
protein tyrosine phosphatase, non-receptor type 12 |
novel protein coding |
ENST00000411553 |
604 |
295 |
UTR5 |
Trans |
|
TCONS_00222403 |
protein tyrosine phosphatase, non-receptor type 12 |
novel protein coding |
ENST00000411553 |
602 |
252 |
UTR5 |
Trans |
|
TCONS_00225244 |
family with sequence similarity 115, member C |
novel protein coding |
ENST00000411553 |
606 |
282 |
UTR3 |
Trans |
|
TCONS_00225246 |
family with sequence similarity 115, member C |
novel protein coding |
ENST00000411553 |
606 |
282 |
UTR3 |
Trans |
|
TCONS_00226448 |
collagen, type XXVIII, alpha 1 |
novel protein coding |
ENST00000411553 |
532 |
299 |
UTR5 |
Trans |
|
TCONS_00226448 |
collagen, type XXVIII, alpha 1 |
novel protein coding |
ENST00000411553 |
532 |
258 |
UTR5 |
Trans |
|
TCONS_00226450 |
collagen, type XXVIII, alpha 1 |
novel protein coding |
ENST00000411553 |
532 |
299 |
UTR5 |
Trans |
|
TCONS_00226450 |
collagen, type XXVIII, alpha 1 |
novel protein coding |
ENST00000411553 |
532 |
258 |
UTR5 |
Trans |
|
TCONS_00226462 |
lincRNA |
novel noncoding |
ENST00000411553 |
532 |
299 |
noncoding |
Trans |
|
TCONS_00226462 |
lincRNA |
novel noncoding |
ENST00000411553 |
532 |
258 |
noncoding |
Trans |
|
TCONS_00226463 |
lincRNA |
novel noncoding |
ENST00000411553 |
532 |
299 |
noncoding |
Trans |
|
TCONS_00226463 |
lincRNA |
novel noncoding |
ENST00000411553 |
532 |
258 |
noncoding |
Trans |
|
TCONS_00226468 |
lincRNA |
novel noncoding |
ENST00000411553 |
532 |
299 |
noncoding |
Trans |
|
TCONS_00226468 |
lincRNA |
novel noncoding |
ENST00000411553 |
532 |
258 |
noncoding |
Trans |
|
TCONS_00234854 |
zinc finger and BTB domain containing 10 |
novel protein coding |
ENST00000411553 |
631 |
277 |
UTR3 |
Trans |
|
TCONS_00235281 |
NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 |
novel protein coding |
ENST00000411553 |
613 |
259 |
UTR5 |
Trans |
|
TCONS_00239255 |
tumor protein D52 |
novel protein coding |
ENST00000411553 |
607 |
294 |
UTR3 |
Trans |
|
TCONS_00239255 |
tumor protein D52 |
novel protein coding |
ENST00000411553 |
647 |
284 |
UTR3 |
Trans |
|
TCONS_00249092 |
transmembrane protein 245 |
novel protein coding |
ENST00000411553 |
615 |
282 |
UTR5 |
Trans |
|
TCONS_00252827 |
discs, large homolog 3 (Drosophila) |
novel protein coding |
ENST00000411553 |
600 |
296 |
UTR5 |
Trans |