Detailed information on ENST00000413987

lncRNA-RNA interactions

Number of interactions: 1

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
ENST00000482603 glyoxylate reductase/hydroxypyruvate reductase processed transcript ENST00000413987 500 228 noncoding Trans

Sequence

>ENST00000482603 (2200 nt)
AGACATTCCAGGACTTCCGGGCACTTCGTAAGGTTTAAAAAGGATGCTTCGCGTTTTCTCTCTCCTTTTTGGAGACAGATTCGCAGTGGTCGCTTCTTCT
CCTTGGATTTGTTAAGGATTCCAAGTAACTCTTATTTGGAGAGAAGACGATCTGCACTTCGCATTTTGGCATTGACATTTAATTTTAGGGTCCTTTATAT
AGAAGGGAGAGTAGGTAAACTGATTTTTTTTTTTAACAGGGAGGGTTTGACAATCTTTGGCAGACTTGGAGCAAAAGATTGAGGTGCATTTCATGCCTCC
TTTTGAGAGTCTTGCTCTGTCGCCCAGGCTGTAGTGCAGTGGCGCAATCTTGGCTGCAACCTCAGCCTCCCAAGTAGCTGGGATTACAAACATAAGCCAC
CACGCCCAGCCCTCATACCTCTTTTAAAAGTCGACCTGTTTTGCAGAAAGTCTGCTGTTTTTGTACTAAAGGCTTTGGAATTTGGCATTTAGCTAGGAAT
GCACATTCTTTCACCTCATTCATACTTTAAGAACCACAGAAGTGACTCTGCTTGGCCAGAAGGCACACTGTGTTGGTGGTTATATTAAAAGTCCTTGAGT
ATTTTGCTTTTCATGATCTTGCTCACTGCAACTTCCGCCTCCCAGGTTCAGGCGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGCGACTACAGGCGTGTA
GCACCACACCTGGCTAATTTTTGTATTTTTAGTAGAGATGAGGTTTCACCATATTGGCCAGGCTGTTCTCAACTCCTGACCTCGTGATCCGCCCACCTCA
GCCTCCTAAAGTGCTGGGATTACAGCTGTGAGCCACCCTGCCCGGCCACTTTTGTATGATTTCTAATGTATTTGTAATTTACCTAACAAATTGCCTAATC
TGCTATGTTAATGTATTTATGAATTAAAATAAATACGACTGCATGTTTGTGGTTCATTTTTGTGGAGGTGGCTGTGGTGACATCAGCCAAGAATCTGAAT
GGTACTGTTGAAGGAAACTAGCATGATAGCTTCAGTTCTAAAGGCCCTGAAACCTAGTCTCAGGTGGGTCCCCCTTGGGTTCACTTTATATTGGCAGTTT
ATTGGGAAAATGGATATTAGGTCCTGACCAATAGGACCGTAAGTCTGGGTTGAGTGCAAGATGAGTTAGACCGATTCTTTAGCTTCCTGCAGTGTAGTGG
AGGAAAAATCGATGGTAGCAACGGGAGGTTGTATCCCTAGCTGATGAGTTGTATGAGCCTCTACTACCTGGCGCACCTCCGCCTGAAGATTGCCAGAATT
GCTTGCCTCATGACGTGAGTCACAATGGAAACTTTGTCAAGCCCCCTGCACTGGCTGCCAACATAAATGTTCAGTACCCTGAAGGATGGGACTGAAGGGG
GATCATCTAGAAGGTAAAGTTACCTACTGGCATAGGGGAGGTGGGACAGCCGTTAAGCCATTTGGAACTTGATGGAGACAGGTTTGAGGGAGGTGGGTGA
GATTGGAGTTTGGTGGACTGTAGAGCTTGCTTGCCAAGGTGTTGAGGTCAGGGTTGGTTTGAGAATGGAAGCTAGTTACTAGCTATGATTGTGGGGGAAC
ACAGCTTGATTTTTCTTACAAGCTAAGAGGAGTGAGGCAGTGTTTAAGAGGGCATGTTAAATGCAGCCAGGCTTGGTGGCTCACACCCGTAATCCCAGCA
CTTAGGCTAAGGCAGGCGGATCACAACATCTAGAGATCCTGGCCAACGCGGTGAAACCCTGTCTGTACTAAAAATACAAAATAACTGGGCATGGTGGTGT
GCACCTGTGGGAGGCTGAGGCAGAATTGCTGGAACCCGGGAGATGGAGGTTGTACTGAGCTGAGACCTTGCCACTGCGCTCCAGCCTGGTGACAGAGTTA
AGTCTCAAAAAAAAGGCATCTTCCTAAAGCAATTGTATTTGTGCTTACCTGTGCCAGGCACTGTTCTAGGTAAGCACTAAGTGGGCTTTAATACAGCATA
TTCCAATGGGGAATCCCAGGAACCAAAAGACTAATTGTCCAAGTCCACAACTAGAAGTGGCACCTCTGCAGAAACAAGCATCAAATTCCCTGCTCAGGAA
GAAGCCAGATGAGTCAGCCCCATTCGTCTGTATGCCCAGTCCCATCCGTGTCCTGCTGTAACTACATAGATCTCACCTGAGTAAAGTGATTTTTTTCTGA
A

Expression



Full and truncated open reading frames discovered in ENST00000482603

In silico ORF/peptide predictions
Nothing found.


RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.

BLAST search results

No hits found.