Detailed information on ENST00000416381

lncRNA-RNA interactions

Number of interactions: 3

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
ENST00000553127 spermatogenesis associated, serine-rich ... protein coding ENST00000416381 548 298 UTR3 Trans
TCONS_00030588 cytoplasmic polyadenylation element bind... novel protein coding ENST00000416381 538 298 UTR3 Trans
TCONS_00193753 alcohol dehydrogenase 7 (class IV), mu o... novel protein coding ENST00000416381 508 298 UTR3 Trans

Sequence

>ENST00000416381 (2012 nt)
CCCACAGGACCTTGCAGTGGGATTTCATCTGCACCATCAGCTTCTTCAGAGAGAGAGGTTGTTGACTCTTCATGTGGATGTCTGAGCTCATATCAGGTGT<br />CTGAAAGAGGCAGATTCTGAGGATTTGGGTCATGATGGCTGCCAAAGCTTCTACTCCTGACTTAAAGGGCAACAATCCTAGGAGACCACCAGCACTTACA<br />TCCCTGGTAGGACATGACACCTGCTTATGGCTCAGAAGTGACAAAAGAGAATTATCAGGATGGCAGTCCTTATAACCAGATGCTTATCAACATTCTTCAC<br />TACATTCTGAAGATGAATTTCTACAAGGGAAATTGTTTATGTAAGTGGTGTGTACCCTTTGATATGTATTGACATAGTGGCACACATAGAGTTGTGCCAT<br />TTAAACTCCCCAAGGGGAGGCATGTGAGGTCGGCCACAGAGGACTGAAGAAATTAGTTAATGCTGACATCCTATCACATAGGGTGGGTCCTGGACTCCGT<br />CATGGACCTGCTGTCATGCCATTGCCACAATTGGAAGACGTGGAAGTGATCAGATGCAATCAAATTTTGTACACAAGCACATCCTGATGTAGCGATGAGG<br />GAAAGGGGGAAGAGGAATGATCATTGCTTGGACTTACAGGACAGAGGCAGAAGGGCTAGGACACAGGCACTCTTTATACGCATTCTTTTTTTTTTTTTTT<br />TTTTGAGACGGAGTATCGCCTGTTGCCAGGCTGGAATGCAATGGTGTGATCTCAGCTCACTGCAACCTCCGCCTCCTGGGTTCAAGCGATTCTCCTGCCT<br />CAGCCTCCTGAGTAGCTAGGACTGTAGGCACGCACCACCACGCCCAGCTAATTTTTTGTATTTTTAGTATAGTCGAGGTTTCACCATGTTGGCCAGGATG<br />GTCTCCATCTCTTGAGCTCGTAATCCGCCTGCCTCGGCCTTCTACAGTGCTGGGATTACAGGCGTCAGCCACCACACCCGGCCCTATATGCATTCATTTT<br />TATGTAAAACATATGCATCAATTCTTTTGTATGAAAACGTTTGGTCATTACTGTGGTACAACAGAAGACCAGGTCAGTACCATATTTTTTTTTCATATGT<br />ACACGGATTTTTATTTTGTTTTAGACATTGTCTTACACACAATAGACATTCAGTATTTGTTGAAATTAATGAAAGAAAAGAGAAACATGAAAACGGTCTG<br />AGAAGACAATAATCTGCTTTTTAATTTATAGACAGCAATTAGGTCAAACAATTATAGCAATGATGACAAAGAACAATATCTGAGGTACACTCAAAACCTT<br />ATGAGGGTTATTTGCCAGTTTTCCTGGCTATTTCTACACCCTTTGATCTCTAGTGAATGTTTCTACTTACAACTACATATTTTGTAAGTTTTGCCTACTG<br />TATTTCAATCAACACTGTAAAAAATGAAGAGAGTCTTTTTGGTTCAAATTTGGTTTTTAGTTAATTATGTGATGTGTATATGATTTTTTGTTACCTTTTC<br />TGTATAGATATCAGGAGAATCGAAAATATGTTGATGGTGGAATTGTGGTATGACATTTTTACTGACTACTACTCTGCAAAAGTTTTATCTATGAGCTCTA<br />TGGGTTGTTCCTGGCTTTTGAAAATTTACTTTAAGGAAGTGTTTTTGGAAATGGATTATAAGTATACAAGTATGCAATCTTATGTATTTGCAACTGTCTA<br />AGATGTTATGATACTTTCCTCCCTGCAATCTGGCATTCATCCATTCAAGACATTTTAATTGAACTCTTACAATGTTCTTAATACTATGATAAGCCCTGAA<br />GGTAAACTGTGACTAAAAATGTTGCAGGATAAAATACAGGATTCCTAGTTAAATTTGAATTTTAGATAAACAACATTCTTATACTAAAAATTATTCCATG<br />TTTATCTGAAATTCAAATTTAGCTGAGTGTCCTGTAACTTTTTATTTTATTTGTTTACTTGTTTGTCTGTGATAAATATGGCAGCCCTAGTAAAAATAAA<br />TATAGCCCCTGA

Expression



Full and truncated open reading frames discovered in ENST00000416381

In silico ORF/peptide predictions
>peptide 1 (74 aa)
MRERGKRNDHCLDLQDRGRRARTQALFIRILFFFFFLRRSIACCQAGMQWCDLSSLQPPPPGFKRFSCLSLLSS

>peptide 2 (74 aa)
MHSFLCKTYASILLYENVWSLLWYNRRPGQYHIFFSYVHGFLFCFRHCLTHNRHSVFVEINERKEKHENGLRRQ

>peptide 3 (73 aa)
MIFCYLFCIDIRRIENMLMVELWYDIFTDYYSAKVLSMSSMGCSWLLKIYFKEVFLEMDYKYTSMQSYVFATV

>peptide 4 (62 aa)
MHQFFCMKTFGHYCGTTEDQVSTIFFFHMYTDFYFVLDIVLHTIDIQYLLKLMKEKRNMKTV

>peptide 5 (52 aa)
MTPAYGSEVTKENYQDGSPYNQMLINILHYILKMNFYKGNCLCKWCVPFDMY


RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.

BLAST search results

Best hit to NONCODE v4:
NONHSAT138007 (Evalue: 0)

Best hit to Swiss-Prot:
sp|Q6B4Z3|UTY_PANTR (Evalue: 5.0E-14)