Detailed information on ENST00000418907

lncRNA-RNA interactions

Number of interactions: 9

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
ENST00000258761 basic leucine zipper and W2 domains 2 protein coding ENST00000418907 835 279 CDS Cis
ENST00000405202 basic leucine zipper and W2 domains 2 protein coding ENST00000418907 835 279 CDS Cis
ENST00000407633 basic leucine zipper and W2 domains 2 protein coding ENST00000418907 835 279 CDS Cis
ENST00000433922 basic leucine zipper and W2 domains 2 protein coding ENST00000418907 835 279 CDS Cis
ENST00000436868 basic leucine zipper and W2 domains 2 nonsense mediated decay ENST00000418907 835 279 UTR3 Cis
ENST00000437745 basic leucine zipper and W2 domains 2 nonsense mediated decay ENST00000418907 835 279 UTR3 Cis
TCONS_00220232 basic leucine zipper and W2 domains 2 novel protein coding ENST00000418907 835 279 CDS Cis
TCONS_00220235 basic leucine zipper and W2 domains 2 novel protein coding ENST00000418907 835 279 UTR3 Cis
TCONS_00220242 basic leucine zipper and W2 domains 2 novel protein coding ENST00000418907 835 279 CDS Cis

Sequence

>ENST00000418907 (648 nt)
TGTAAGGACAGATAGCAGGGCCTGCCCTCTGGCCAGCAATTTCTCTTCTTCTTTTTCCATGTGGCTTGTCAGAGCACTACGTTCCTTATGACAAACAAAA<br />GGAATCCACAGAAACTTGGTAAAAGAAGCAGAGAAGACACTACTCCATATGTGTAAAATGTGGAGCCCCATGACCTCCTCTGCCTCATTGCCTGCTCTGC<br />CTCTCAAAGAGCTTCAGCAAAACACAGAAGCACAGCAGTGGCACGTGGATGGATACCTTTATAAAAGAGAACCACAATCTTCTGAAAGGCTTTCATGAAA<br />TGGATGTTGTCGTAGCAGTATTCCTGAACCTTCTGGAGGAGGATCAGCTCTGACTGGCCTTGGGAGCTGAACACGGCCAGCAGGGGAGCATATTGCTAGA<br />ACAGAAGTGGAGAGTAAAAGCCGTCACTTGCGTGGGAGAAATGCCAGCAGTGACTTGAGCAGCCTTCAAAAGCAGAAGGAGCCGGGCAGTCCCAGTCCCT<br />GTGCTGGCTGGAGGAAGCCACATAAAAGTGTGACATCCTGGCATCTACAAGCATCACAAGGCTTTTTATGTTTGCTTCTTTTCCCCATGGAAAATAATGT<br />ACAAATTCTTGCTTGGAGAAATATGATTAAATATACTGCTATCCTTAA

Expression



Full and truncated open reading frames discovered in ENST00000418907

In silico ORF/peptide predictions
Nothing found.


RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.

BLAST search results

Best hit to NONCODE v4:
NONHSAT119300 (Evalue: 0)

Best hit to Swiss-Prot:
sp|Q4R6R4|BZW2_MACFA (Evalue: 2.0E-21)