Potential function | Interacting transcript | Gene description | Transcript biotype | lncRNA id | Alignment score (LAST) | Alignment length | Transcript region involved in interaction | Genomic orientation of interacting RNAs |
---|---|---|---|---|---|---|---|---|
ENST00000339732 | polypeptide N-acetylgalactosaminyltransferase 15 | protein coding | ENST00000420918 | 610 | 275 | UTR3 | Trans | |
ENST00000375120 | OTU deubiquitinase 3 | protein coding | ENST00000420918 | 531 | 309 | UTR3 | Trans | |
ENST00000375234 | AhpC/TSA antioxidant enzyme domain containing 1 | protein coding | ENST00000420918 | 505 | 304 | UTR3 | Trans | |
ENST00000391877 | delta(4)-desaturase, sphingolipid 1 | protein coding | ENST00000420918 | 504 | 264 | UTR3 | Trans | |
ENST00000446045 | AhpC/TSA antioxidant enzyme domain containing 1 | protein coding | ENST00000420918 | 505 | 304 | UTR3 | Trans | |
ENST00000511184 | E74-like factor 2 (ets domain transcription factor) | nonsense mediated decay | ENST00000420918 | 514 | 299 | CDS_UTR | Trans | |
ENST00000513143 | podoplanin | protein coding | ENST00000420918 | 515 | 302 | UTR5 | Trans | |
TCONS_00000720 | lincRNA | novel protein coding | ENST00000420918 | 519 | 309 | UTR3 | Trans | |
TCONS_00001821 | low density lipoprotein receptor adaptor protein 1 | novel protein coding | ENST00000420918 | 640 | 279 | UTR5 | Trans | |
TCONS_00001823 | low density lipoprotein receptor adaptor protein 1 | novel protein coding | ENST00000420918 | 640 | 279 | UTR5 | Trans | |
TCONS_00028040 | ankyrin repeat domain 16 | novel protein coding | ENST00000420918 | 619 | 305 | UTR3 | Trans | |
TCONS_00030591 | cytoplasmic polyadenylation element binding protein 3 | novel protein coding | ENST00000420918 | 665 | 301 | UTR3 | Trans | |
TCONS_00030592 | cytoplasmic polyadenylation element binding protein 3 | novel protein coding | ENST00000420918 | 665 | 301 | UTR3 | Trans | |
TCONS_00053501 | anoctamin 4 | novel protein coding | ENST00000420918 | 544 | 308 | UTR3 | Trans | |
TCONS_00053502 | anoctamin 4 | novel protein coding | ENST00000420918 | 544 | 308 | UTR3 | Trans | |
TCONS_00053513 | anoctamin 4 | novel protein coding | ENST00000420918 | 544 | 308 | UTR3 | Trans | |
TCONS_00053521 | anoctamin 4 | novel protein coding | ENST00000420918 | 544 | 308 | UTR3 | Trans | |
TCONS_00053527 | anoctamin 4 | novel protein coding | ENST00000420918 | 544 | 308 | UTR3 | Trans | |
TCONS_00053528 | anoctamin 4 | novel protein coding | ENST00000420918 | 544 | 308 | UTR3 | Trans | |
TCONS_00085508 | neuregulin 4 | novel noncoding | ENST00000420918 | 627 | 281 | noncoding | Trans | |
TCONS_00098643 | fatty acid 2-hydroxylase | novel protein coding | ENST00000420918 | 626 | 271 | UTR5 | Trans | |
TCONS_00098644 | fatty acid 2-hydroxylase | novel protein coding | ENST00000420918 | 626 | 271 | UTR3 | Trans | |
TCONS_00098645 | fatty acid 2-hydroxylase | novel protein coding | ENST00000420918 | 626 | 271 | UTR3 | Trans | |
TCONS_00098647 | fatty acid 2-hydroxylase | novel protein coding | ENST00000420918 | 626 | 271 | UTR3 | Trans | |
TCONS_00147093 | ATPase family, AAA domain containing 2B | novel protein coding | ENST00000420918 | 617 | 293 | UTR3 | Trans | |
TCONS_00170642 | solute carrier family 6 (neurotransmitter transporter), member 6 | novel protein coding | ENST00000420918 | 517 | 299 | UTR3 | Trans | |
TCONS_00175015 | copine IV | novel protein coding | ENST00000420918 | 563 | 307 | UTR3 | Trans | |
TCONS_00198039 | hexosaminidase B (beta polypeptide) | novel protein coding | ENST00000420918 | 558 | 301 | UTR3 | Trans | |
TCONS_00213182 | tubby like protein 4 | novel protein coding | ENST00000420918 | 604 | 306 | UTR3 | Trans | |
TCONS_00219453 | WD repeat domain 27 | novel protein coding | ENST00000420918 | 584 | 309 | UTR3 | Trans | |
TCONS_00232466 | tumor suppressor candidate 3 | novel protein coding | ENST00000420918 | 502 | 280 | UTR3 | Trans | |
TCONS_00232467 | tumor suppressor candidate 3 | novel protein coding | ENST00000420918 | 502 | 280 | UTR3 | Trans | |
TCONS_00240685 | metastasis suppressor 1 | novel protein coding | ENST00000420918 | 534 | 233 | UTR3 | Trans | |
TCONS_00240688 | metastasis suppressor 1 | novel protein coding | ENST00000420918 | 611 | 305 | UTR5 | Trans |
>TCONS_00240688 (2531 nt)
AGACCTGAAGGCTGCTTCCGCTAACCCGGGCTGGCGCTGCTAACCTCACCCAACGATCCCTGCTGTCGGAAAATGTCCAGAGGCACCATCCCTGCTATGA
AGAGGGAATGCCAGTACAACAGCCACAAGGGGTCTTCCTGTGGCCCTCAAACAAAAAATCACTGCATTACATCAGCAGACTGCATTGGAGAGAAAGGCGC
CGGGACAGAAAAGCCTGAGATAAACCACCTGTCATTCTTGGAGAAAAGGATGCTGCGGCTTTCCCGATTTGGTTGATGAGATGGAAAATCAACCCTTACA
GGAAGGACATCACCAATTCCGGAAAGGATGCTGCGCCAGTCATGTTTCCGCACTCTGTGAGACGTTGAAATCTCCAGAAGTTGCCCAAGGTTTTCAAGCT
GAACACAGGAGAAATGACTCTGGATCTCTGAGGACTGTTTTCCTCAATAAGGAGCTGCAATCTTGGCTCCACCACCCTCCCTCCAAAACATCTCGTGTGT
CTGGTATCTGGTTATATTGTGGCCTGACAGAGAAGTTTCTTTCGGGGCCAGTGAATTAAAAAAAAAAAAAAAAAGAAAAGCGGGTCCTACCAACTCATTA
ATACTTTAATACTTTAAATTTCCCTCTTTATAGTAGGTTGAAATGTCAGTATCTCTTAAGAACAATGGCTGAACCAAATGTTTCCTCAAAACTCACATTT
TTTCCCACCATTTCAGAAGCTGCCTCAGGACTAAGCTTTGATTTTTTTTTTTTTTTTTAATCTGGCCCAAATTCCTATCTAAGGGGCCTGGGGAGTCATG
CCCAACAAACCATAAATTCTCATCAGATGAGTTTTATTTAACCCTATATATGGTGACTTGCTTTCCAGTCTGACTCTGGCATGACATGTGACAAAGAAGA
AAGTCAAAATATTTTACCCCAAAACATGTTTCTTTGCCATATTTTGAAATGGTCCTGCAAAGCTGTGCTTTGTGGGGGAAAATATGCATCTGTAAAGAAT
CTCTATTAACACAGCTAGATCTTTTTCTTCCAGGCCCTCCCAATCCTGAAGAGACTGAGAGTCTAGCATTGTTTTAAAGGTCTGAATAGGAAACATTTGT
CATCTATCATCTCTAAGGGTAGCCATTATAAGACTTCAAAAGAACCTTTTGAAGTATTATAATCTTTTATCTTAACCTGAACATGTGCTTCCTATTGATC
CCAGGTCTTCAGACAATTGTGAACTCAACCATTTGTCAATTAGAAAATGTTTAAATTGGCTGGGCACAGTGTCTCATGCCTCTAATCCCAGCACTTTGGA
AGACCAAGGCGGGCAGATTGCCTGACCTCAGGAGTTCGAGACCAGCCTGGGCAACATGGTGAAACCCCGTCTCTACTAAAATACAAAAATTTAGCCGGGC
GTAGTGGCATGCACCTGTAGTCCCAGCTACTTGGGAAGCTGAGGAAGGAGAATTGCTTGAACCCGGCGGGCAGAGGTTGCAGTAAGCAGAGATCGTGCCA
CTGCACTCCAGCTTGGGCAACAAAGTGAGACTCCATCACAGAAAAAAAAAAGAAAATGTTTACCTTTACCTATAGCCTGGAAATCCCTGCTTTGAGTTGC
TCCATCTTTCTGAACCAAACCAATGTTATTTCTTAAACGTATTTCATTGATGTCTCATGCCTCCCTAAAATGTATAAAACCAAGCTGTGCCCCGAACACC
TTGGGCACATGTTCTCAGGACCTCCTGAGGGCCGTGTCACGGGTCATAATCACTCATATTTGGCTCAGAATAAATCTCTTCAAACATTTTACAGAGTTGA
CTCTTAGTCAACATGTCCATACCTGATGAGATGCTTCATCAAAATTCTAGTGGACTGGCTAGTTCAGAAAATGGACCAGCCAGGTTTGCTTAAATGCACC
CCTGCACAACTATCTCACTCCTGCTTGGAGCCGGCTAGATCAGGAGACCTGTCCCTAAACTAATGTACTCCATGTCTTAAGTCTTTTTGTTTTGTTTTGT
TTTTGTTTTTGACAGAGTCTCAGTCTGTCACCCAGGCTGGAGTGCAGTGGCGTGATCTTGGCTCGCTGCAACCTCCGCCTCCCAGGTTCAAGAGATTCTC
CTGTCTCAGCCTCCCAAGTAGCTGGGACAACAGGTGTGCACCACCATGCCCTGCTAATTTTTGTGTTTTAAGTAGAGATGGGGTCTCACCCTGTTGGCCA
GGCTGGTCTCAAATTCCTGACCTCAGGTGATCCACCCACCTCGGCCTCCCAAAGTGCTGTAATTACAGGCATGAGCCACCGCACCCAGCCCATGTGTCTT
GGTCTTTTTTACTAATATTGATTATAAAATGGATGAAACTTTGGATAAAATTTCTGCGTTAGAATTTCTTTTTATATCTGTCCTAAAGCTTGTAACTACT
TGCTCATGATTTTTTGTGTATGTTTAGCAATGTGCATGTCATTGATGGCCTTTGTAAAGTATGTTCAATTGAGTTGTGGAGACAGAGGTGCAATTGGAGT
AGGTTGTAAGAATAAAAAGGAGTAGGCAAAAA
In silico ORF/peptide predictions
Nothing found.
RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.