Detailed information on ENST00000422488

lncRNA-RNA interactions

Number of interactions: 2

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
ENST00000393735 solute carrier family 26 (anion exchanger), member 5 protein coding ENST00000422488 1046 304 UTR5 Cis
TCONS_00230128 solute carrier family 26 (anion exchanger), member 5 novel protein coding ENST00000422488 2262 672 UTR5 Cis

Sequence

>TCONS_00230128 (2724 nt)
GAGGCTTTCTTCACAGCTAGCTGATCGGATCCTTGCAGCTGTTTCTTCTGTAGGTCTCGGAGCTCACTGAGAACGTCCAGCACGCCTTCCCGGCGGGGCC
CGGCCCAGGTGCGCACTAGATGAGGCAGTCAACCAAGTCAATTGGTTCCCGATCAACTAAATCTCTCCTAAAAATAAACACTGCCGCGAGCTTCGAGAGT
TCAGCGTGTCAGAGCCTCTATGATGGCAGAGCACCTGCCGCGATGCCTGATTGGTAGGGAGAAGGATTTCCCGGGAGGGGGCCAATACCAAATTTTAGGG
CTGTTAGGCTCTGAGCAGTCCCTTCGTGACCGGATAAGTCAGAGACCCGGGGTTTGAGCCTTGCCCGGCGCTGAGCGGAGGGCCCAGTTTCGGGACCACA
GCCTTGCTCCCTGGGAGCTCCGGGCGGCCAATGCCGGGCAAGCCCAGCCCGGCACAGGAGGAGGCAGGGCCCGTCTCCGGAAAGAGGGCCAGAGGCAGAA
CTGAGGGCCTGGTTTTGTGTAATTCGATTTGGATACAAACAGGCCAGACCCAAACTGGAAACGGCGAAGGGCTGGATTAGCACCGAAGGGATTCGAGGAG
GCAAACGGGAAGTAAAAATGCTGTGTGGAGCTGCAGAGGGCAAGGGGACAGGGGTTGCAAAGGAAAGAGCTTCGTGAGACTTTCTCCTTCCCGGCGTAGG
GACCAGCAGAGTGCGGGCAGGTCAGCCCTGTCACCGGTTCGTTTAGGGAAAAAGCGCGACATGGGGCCTGGGAGACAGGGGCAGAGGCGGTGACAGCGAG
GGCCCCTGCTCGGGTGGGCCCGCGGGCCTCAGCTCAGTCCCCTCCCGAGGGACCGCGACCCCCGGCCCCGCGGCCGCCCGCGCGCACTCACCAGCCCGGG
CTGCCCTGGGCGGAGCCGCCCCGCCGCGCTCCACAGCCGCTGCCTCTTCGACGCGCGCGCTGCCTCCAGGTGCGGCTCTAGGAGGAGGCGCCGCGGGCAG
TGCCGGCCGCGCCCCGCGACTCCCGGTAACCCGAGCCCGCCCCGCCCCGCTAGGGCCAGGCCCCGCCGCCACCCTCCGCGCTGGGACGCCGGGGCGCGGG
CATCCCTGCCGCCTACGGATCTCTTCCCAAGCACCTAGAACTTTCCAAAGCGTGCTTGGAATTTAACACCTTGGTCGTCGATCCCCGCAAATATACTCTG
ATGAGACCGGCTTTCTTCCCATACCGCCCAGGAGTTTCTCCAGGTGGCATTCCTGTCGCCTTGAGGTGGAACATCAGTAGAGGCTCGAGGCTGAAGCAAG
CACAATACACAAGAGACTCCGATTCGTACAGGAACATTTCGAAAACAGGAAATCCTGAGGACAATTATTTCATCCTGAGCAGGAACACATTTACTCTTAT
AAAAGTTTCAGCTTGAGAGACAGCTGGCAAGATGGCTGAATAGGAACAGCTCCAGTCTGCAGCTCCCAGCAAGATCAATGCAGAAGGTCCAATTCTTTTC
TAAAAGTCTTCTGGCTAGTCCCAGCATTTCCAGGGAAGCTGAACAGGTGCAGCCGGAGGCTTGGAGCCACTATGGAAGCAGCACAGTTGATGCCTCAGAG
GATCCAGAGAAAAGACCAGATAACTATAATTCAGCCTTCACCCATATTGTGTCTTTTTGATTTTGTCTGAGTATATATGCCGCACAACAAGCAGCTTATC
TCTGAGATTCAAATAGTTACTGCAATTCCATTATCTGTTTTTTTACTGTGAGGGATTTGGAGCCACATTTAGTCCTACATCACAGATACAGGACTCAAGA
GTCAAAGTGCACAGAAATTTGAATTCCGATAAGAATACTCTGAGCCAGTTTATTCTGGGGTACATACTTCATTTTATGCTAGAACTCTGCAATCCTGATG
AAAGAGGGCTTGCATTGCTCAACTAACTAACTCACCCGTCTCTCCTGCAGTATTAGAAACTACTTCTGTATGTACACGTTACAGTTTCTAGGAACTCCAT
TTTTGCAAGACAGATAGGAGCCAGAAAATTTGTTCCTTCAACTGTATATCGCTAATTAAACATAAAATCAAATCAGCATTTTAGGTACTTGAATAACTAG
TCTGTGCTTACTTTTATTCATATGGAAGCAGTGTTTAAATTATTCTCTGATTGTAAACTCACTTATGTAAACCATTATACAGGAAAAAAATGAGTAATGA
AGCAAAGTTCTGAAGCAGATCTATGTAAGCAAATTTCAATAACCTTCTTAAGAGAATATGACACTTAGTAGTGGTGAGGGACATTTTAAGCTTTTTCTAT
TTACAAGTTTTTTTTAAACGAGGGTGTTTCAAAGTAAATATTTGCTGTTACGTTATGCCACATGATATACTAATAAATGAATTAATGAAATTAACCTAAA
TATCCAGTATTATTATTGAATATATAGCTACTAAAATTTTATATTCAAATATATCCAAGGACATGAGGAAATAAGGATTTAATTCTAAACAAAAAAAGAA
GCTATGAAATATATATAATTTAAGACTATAATTTTGTTAAAAATATGTTTATGTAAATGCGCTAAAAAAAGTTCTTTAAGAATATATGCCAAAATATTGA
CAATGGTTATCCCCTGAGTGATTTTTATTTTCATCCTTAGGATTTTCTGTATTTTCTGTTTCACATTTTGAACATGTATACTTTTACAAGAAAATATGAA
CTAAAATTAAAAATTTTTAAACTCC

Expression



Full and truncated open reading frames discovered in TCONS_00230128

In silico ORF/peptide predictions
Nothing found.


RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.

BLAST search results

No hits found.