Detailed information on ENST00000422841

lncRNA-RNA interactions

Number of interactions: 2

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
ENST00000209929 flavin containing monooxygenase 2 (non-functional) protein coding ENST00000422841 800 276 CDS Cis
TCONS_00008734 flavin containing monooxygenase 2 (non-functional) novel protein coding ENST00000422841 800 276 CDS Cis

Sequence

>TCONS_00008734 (657 nt)
TTTATTCCTAATTAAATGGGGAGACAAGTCTTTCCAGAGGAACTTCTACTTTACTTTTTACAATTCCTCCTCTTATTTCATAATTCTTCTTCAAACTTGT
TTAATATGTTTTGACTTAATTGCTTTGTTTGTCCTTTTAAGAGAAGTAATTTTTCTGAATAAGGTGGAGGAGAGTTAGGAGTTAACTCTGTAAGCATGGC
AGAGACAGGTTTTTGTGTAAAACTTCGACGGTAGGGAATAATATAACAGCCTACAAGAATAAGTACACCAATAACAACAGCAAATGAGCTGTTCGTGGCA
GTACATTGCGGAGCATAGAACGAAACCGGGTGTGGAACACTGAGTCCCAAGGATAGCCATCTTCAGAGATACGGCTCATGACCCAGGTACATGGTAAGCA
GAGAGCATCACACCTGAGCAGCATTCTTACTCAGCTCAACAGCAATATCTGAGCCTGAGTTTCCCATTCCAATCACCAGGATGCGTTTTCCCTCAAATCC
ATCTGGATGCTTGTATTGGCGGCTATGGAAATATTGGCCTTTGAACCTCTCCATACCTTCAGGGGGAAGAAGAGAGAAGTCTGTGAGCTCCAGAGCAACT
ATGTCAAGCTAATTTCAATAAAACTGCATTGCCAGCTTTTCCTTTCTGGAGTTAATAA

Expression



Full and truncated open reading frames discovered in TCONS_00008734

In silico ORF/peptide predictions
Nothing found.


RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.

BLAST search results

No hits found.